Conserved Protein Domain Family
antibiot_sagB

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TIGR03605: antibiot_sagB 
SagB-type dehydrogenase domain
SagB of Sterptococcus pyogenes participates in the maturation of streptolysin S from a ribosomally produced precursor polypeptide. Chemically similar systems operate on highly diverse sets of bacteriocin precursors in numerous other bacteria. This model describes a domain within SgaB and homologous regions from other proteins, many of which appear to be involved in biosynthesis of secondary metabolites. While some substrates may be intermediates in non-ribosomal peptide syntheses, others are involved in heterocycle-containing bacteriocin biosynthesis, and can be found near SgaC-like (see TIGR03603, cyclodehydratase) and SgaD-like (see TIGR03604, "docking") proteins. Members of this domain family are heterogeneous in length, as many have a partial second copy of the domain represented here. The incomplete second domain scores below the cutoffs to this model in most cases.
Statistics
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PSSM-Id: 188352
Aligned: 15 rows
Threshold Bit Score: 175.184
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011087310 299 TLGELAQFL-DTTARVVS--EwkSGPYFDGGP------DvtysT----RPYPSAGSAYELELYLTVSNCEGLARGLYHYD 365 Bradyrhizobium ...
WP_011948240 139 SLNDVANIF-YYTQGICD--E--VEPYNLEGN------K----KkiklRANPSAGGLYPIQLYVYMKNIKDLKDGIYTYY 203 Clostridium bot...
WP_011011879  35 TLGELSQLL-WAAAGKNA--W-----------------G----K----KNYPSAGACYPLEVYAVVSNVENLPPGLYHYN 86  Pyrococcus furi...
WP_003730944 121 DLSTFSNII-QFSFGLST--R--KLVYNDLQS------T----T----RHYSSGGGLYPIDVFLYINNISGIAKGIYKYQ 181 Listeria monocy...
WP_004068677 100 KLNELSVLL-KLSSGVVL--I--QDEENHSIY------H---------RSFPTAGGLNSCHVYLISLNVDDLPFGSYYYD 159 Thermococcaceae
WP_001175518  59 TLDEIGHYL-WCSFGLTQ--L--CQLNSEKIL------F----R----RSIPSGGALYPNELYIYLK-IDDYPDGIYHYD 118 Bacillus thurin...
WP_020905038 140 PLQDLSNIL-YYACGVSS--Q--ASIRDGASD------K----It--lRNCASGGGLYPIHLVFYARNISKLIDGFYEYL 202 Streptococcus p...
WP_011277427  64 NLNKISSLL-WYSVGVKE--I--E----NGIQ------F---------RMFPSAGNLAETEVYLISL-YTDLEKGVYHYD 118 Sulfolobus acid...
WP_002195972  53 NFEIISYLL-WYTYGFTSynW--LTKPTLNGQntslsfF----R----RSVASGGGLYPGEIYLYVESIKGIKSGLYYFD 121 Bacillus cereus
WP_011438587  70 TAENVSSLLrWAVGPQRD--V--RLPDGSQHR------M---------WMAPSAGGLHSLSIYLVIARGAQLPGGVFRYD 130 Frankia
WP_011087310 366 AGSHALVAISA----S--TQ--QLQAHAVAAQFAMDAPGQPQILITIAARFGRVSWKYSSIAYSLILKDVGSLIQTFYLA 437 Bradyrhizobium ...
WP_011948240 204 PYSHGLKPIEV----N--KEllKVDNFAEFGVLNAENAN---LIVFYVYNFLKNSRKYGDAGFSYALIETGEMAQNLQLV 274 Clostridium bot...
WP_011011879  87 GEEHTLELIRK----G--D----LREELAEACLGQRCVATAPVNIVIVAHFERTTSRYGERGIRYVYMDTGHMGQNIYLQ 156 Pyrococcus furi...
WP_003730944 182 PYTHSLHPLDV----D--KI--DVESFFVGDNIDTSNMN---FCVFFGYSINKNYVKYGELSLLNTFVELGGISHNFDLV 250 Listeria monocy...
WP_004068677 160 PLTHELIKIEEyqisQ--KN--EFLDTLVKVLGNQEWIRTAGLILIITGDYSKIRLKYGDRGYRYLLLEAGHIMQNFYLI 235 Thermococcaceae
WP_001175518 119 AAHHRLILLRE----G------NFDSYITEALGNRCNIQSCFGAAFVSTMFWKNFFKYNNFSYRLQGLDSGVLIGQLLEC 188 Bacillus thurin...
WP_020905038 203 PYQHALRCYRH----Ss-EE--NVRDFAEYGAINAENCNIIIIY---VYHYIKNTRKYGNQATAYAFIESGEIAQNIQLT 272 Streptococcus p...
WP_011277427 119 PVEGSLDVLSN----DldEE--LMLQAIKNSLPDITFV---PLIILLTSLYWKPMVKYGNRGARFSLIDTGIVIENFYLV 189 Sulfolobus acid...
WP_002195972 122 VRGPRLILLRE----G------NFQEFIKKSLQYNQDRN---VYIFITSFYWKNFFKYLNFSYRLQGLDIGAIVSQAHLI 188 Bacillus cereus
WP_011438587 131 AEDHCLQTLRS----G------EPTAALRSVLVQPEFAERAPMAVVVVARLDTTLVKYPARHYRTLHLDAGIAVQNLYLV 200 Frankia
WP_011087310 438 ATDMDLGGCAIGSTNIDLFATMTELE-FHIEGPVGQFALGR 477 Bradyrhizobium diazoefficiens
WP_011948240 275 STALGYGACDIGGYEKQYIEEVLDID-GVLKHVVHMTVVGW 314 Clostridium botulinum
WP_011011879 157 ATALGLGTVAVGAFYDEKVKEVLGVE-G---HPVYVFPVGR 193 Pyrococcus furiosus
WP_003730944 251 CHSVHYTSCPIAGFNKSYIEKLLYLD-GINDHIIFTNICGK 290 Listeria monocytogenes
WP_004068677 236 ASMLNLGVCSIGGFYDDYIAKLIHVD-NTNELVLYLGGMGK 275 Thermococcaceae
WP_001175518 189 AKQFGYTNGVYFQFLDRAINHLLGLS-EGEESVYAVVPFST 228 Bacillus thuringiensis
WP_020905038 273 ATALTYGSIDIGGYNKEYLQELLDLD-GLGEHVIHMTLVGT 312 Streptococcus pyogenes
WP_011277427 190 ATALGLGISAIGGFNDDFFNKLIGVGmEKGEVVIGMLVVGE 230 Sulfolobus acidocaldarius
WP_002195972 189 SKKLGLNSEIRYHFDDKKINDFLGIN-AEEESSYVVLPIDM 228 Bacillus cereus
WP_011438587 201 AAALGLAGCAVTAFDDQALAELLRLP-DTMFPTV-VFPVGR 239 Frankia
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