Conserved Protein Domain Family
YloV

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TIGR03599: YloV 
DAK2 domain fusion protein YloV
This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Statistics
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PSSM-Id: 274671
Aligned: 50 rows
Threshold Bit Score: 414.654
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011195491  11 LKQMILRAAARLDAEKDAVNALNVFPVPDGDTGTNMSMTLTSANREVE-----R---A---G-DRTVGEVAAALAQGSLM 78  Symbiobacterium...
WP_011227781  10 VAEAFRYATRWFQVYVEELNALNVYPVPDGDTGTNMLHTLEAARRELD-----L---A---D-TSRMDQVARALAYGSLL 77  Thermus thermop...
WP_011564349   5 lafivaaahaalkahaarIDELNVYPVPDGDTGTNMLLTLESVLKETS-----G---C---S-YDSVEAAVKAGARAALM 72  Rubrobacter xyl...
WP_011728319  11 LRDWAHTAVGDLITHTDEINRLNVFPVADADTGTNMLFTMRSAWAHAD-----A---Q---S-GGDVAQVASALAAGALQ 78  Mycobacterium s...
WP_006769399  30 vlgWASRAVAELSARRAEINALNVFPVPDADTGSNMTHTMEAALNEAR-----K---L---DpDATVARITEALAVGSVR 98  Corynebacterium...
WP_009479700  12 LESWARTAVAGLEKRCEEINSLNVFPIPDSDTGTNLLFTMRAALGAID-----E---FagsG-TKDVRQVAIALARGAVA 82  Rhodococcus
WP_011265725  46 VLEWARTAVEQLSERRAEINALNVFPVPDADTGSNMTYTMTAALDEAL-----K---Lg--E-LGDVARITEALAVGSVR 114 Corynebacterium...
WP_003901506  21 LRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADlhansQ---A---D-AEDVARVAAALAAGALN 93  Mycobacterium t...
WP_011210729  20 LMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMRAAVAAAE-----DrvgA---S-DGTAHEVATAMARGATA 90  Nocardia farcinica
WP_011559335  11 LRDWAHAAVEDLISHTDEINGLNVFPVPDADTGTNMLFTMRSAWSRAQ-----D---C-----VGDVAEVSAALAAGALH 77  Mycobacterium
WP_011195491  79 GARGNSGVILSQLFRGFAKYL----D--------GK--------V----TIDGRDLARALQEGVDTAYKAVMK-PVEGTI 133 Symbiobacterium...
WP_011227781  78 GARGNSGVILSQILRGFAEAL----K--------GK--------R----ALDGSLLRRALRMGAESGYKAVMR-PVEGTI 132 Thermus thermop...
WP_011564349  73 GARGNSGVILSQMIRGACEVL----A--------RR--------T----TFTAEDFAAALEGAERRAYASIRQ-PVEGTM 127 Rubrobacter xyl...
WP_011728319  79 GARGNSGVILSQILLGLAEVItsaaA--------DR--------GgdllDVDGPLFGAALRHGVALVAVSMGD-PVPGTI 141 Mycobacterium s...
WP_006769399  99 GARGNSGVVLSQVLRAIAQAA----A--------D---------G----VVDGRTIQKSLSIARSLVDRAITD-PVEGTV 152 Corynebacterium...
WP_009479700  83 GARGNSGVILSQVLRGIAEAA-------------VT--------P----AVDTRTVRTGLLMATNLVTDAVSY-LVEGTI 136 Rhodococcus
WP_011265725 115 GARGNSGVVLSQVLRAIAQAA----A--------D---------G----VIDGHTIQEALSIARSLVDRAITD-PVEGTV 168 Corynebacterium...
WP_003901506  94 GARGNSGVILSQILRGIAEVT----A--------TAaaasgavlR----AVDANALGAALWRGVELVVASMGGvEVPGTI 157 Mycobacterium t...
WP_011210729  91 GARGNSGIILSQLLRGIAEAS----E---------P--------G----PLTAATLPRALRRAAELVRAALSA-PVEGTI 144 Nocardia farcinica
WP_011559335  78 GARGNSGVILSQILRGFAEVT----AgaaargggTL--------P----EVDGALFAAALRHAVDLVEAA-LD-TQPGTI 139 Mycobacterium
WP_011195491 134 LTVAREAAAAAQQ-ASRKD-RS--AAAVMRAAVEAAEAALARTPELLPVLKKAGVVDSGGKGLTVIYHGYYEALSGEASd 209 Symbiobacterium...
WP_011227781 133 LTVARAAGEGARG-EA--------LEEVLETALEAAREALERTPELLPVLRQAGVVDAGGAGYVRLLEGMRGYALGLPL- 202 Thermus thermop...
WP_011564349 128 LTVIRDAARAAREaLKEKG-AD--LPAVIRAAAREAHASVRRTPQLLGVLREAGVVDAGGLGVAVILDGLYACVSGKRVe 204 Rubrobacter xyl...
WP_011728319 142 VTVLQAAADAAEK-CVVGG-AD--LAEVAASAADAAATALERTPQQLDVLAEAGVVDSGGRGLLVLLDAMTATITGHAPr 217 Mycobacterium s...
WP_006769399 153 VTVLRAAAIAAEQ-AVEEGyGS--LTEVVNHAVWAARTALARTPSQLEVLREAGVVDAGGQGLVILLESLQQQITGAPGp 229 Corynebacterium...
WP_009479700 137 VTVLRCAADAAAE-YPDE--AP--IAVTARAAADAAASALTRTPSQLEVLGTAGVVDAGGLGLVVILDALVTAVTGAPPd 211 Rhodococcus
WP_011265725 169 VTVLRSAAIEVEH-LVEAGhAA--LPDVVNAAVKAARTALARTPSQLAVLREAGVVDAGGQGLVILLESLAEQINGNPPh 245 Corynebacterium...
WP_003901506 158 VSVLRAAAGAVDQ-CAHEG-----LAGAVTAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRSTICGQAPa 231 Mycobacterium t...
WP_011210729 145 LTVLECAADSASA-CREP---S--LAEVAVAAADGAAKALGDTPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPa 218 Nocardia farcinica
WP_011559335 140 VSVLGAAAHAADA-QASGT-AAsgLPEVVVAAADAAAIALDETPGQLDVLADAGVVDAGGRGLLVLLDALTRTLGGHAPr 217 Mycobacterium
WP_011195491 210 v------aT------VPTQIPP-EEEPvrtrhdtspatqvafrVDEE--------IS--------------D--IRF--- 249 Symbiobacterium...
WP_011227781 203 -----------------PEPPK-VERY----------------AQTA--------FA--------------T--EEF--- 221 Thermus thermop...
WP_011564349 205 e------eP------APEEGGA-PDLE----------------AI-H--------AA--------------E--EAW--- 227 Rubrobacter xyl...
WP_011728319 218 r------pA------YTPAPPR-ATAS----------------SSVS--------AR--------------A--GVPadd 244 Mycobacterium s...
WP_006769399 230 dggldagtQ------TGTRSPE-GASR----------------PITI--------DH--------------DshGRV--- 261 Corynebacterium...
WP_009479700 212 r------aPialhvpRRTPSRH-RAEL----------------VPVSappasqgpHA--------------H--PGP--- 249 Rhodococcus
WP_011265725 246 h------pS------HHSEPAE-EPSF--------------------------------------------H--GKT--- 263 Corynebacterium...
WP_003901506 232 r------aV------YEPSPRAlPTDT----------------ATQR--------PA--------------P-------- 253 Mycobacterium t...
WP_011210729 219 r-----peY------RRPAAVP-GARP----------------AAPG--------HAvartpaasasasegP--PTP--- 257 Nocardia farcinica
WP_011559335 218 r------pS------YRPAAPP-ARRA----------------AGAA--------P------------------------ 236 Mycobacterium
WP_011195491 250 -------P----------YDCEFFIRRYRdggPIPMDHIARELEQWGDSIYVVGSE-D-L-----AKVHVHASNPGPVLS 305 Symbiobacterium...
WP_011227781 222 -------G----------YCTEFLMEG-V---EVPVERIREAVAPFGDSLLVVGAE-G-Y-----VKGHIHTDDPDGLLA 273 Thermus thermop...
WP_011564349 228 -------G----------YCTEFFVNG-F---SGDPEALERWMHGAGKSVLVVSDD-D-L-----VKVHLHTQDPGAALS 279 Rubrobacter xyl...
WP_011728319 245 vaptqvpQ----------FEVMYLLSGCA---PEAVEHLRAGLEQIGESVAIATSGgD-R-----YSVHVHVDDAGAAVE 305 Mycobacterium s...
WP_006769399 262 -------Gd---------LEVMFYLTCAQ---AEDFDALQQEIAGLGDSLLIARES-DtR-----GTVHIHSRRAGEVIE 316 Corynebacterium...
WP_009479700 250 -------GpdcdegsdqdFEVMYLVAESD---EDRMAELRTTLNALGDSIVIVGDG-G-Gg----WSVHVHCTDAGAAVE 313 Rhodococcus
WP_011265725 264 -------Gd---------LEVMFYIACDS---AQTLDALHNELETLGDSLLIARET-NtR-----GTVHIHSRRAGEVIQ 318 Corynebacterium...
WP_003901506 254 -------Q----------FEVMYLLAVCD---AAAADQLRDRLKELGESVAIAAAPpD-S-----YSVHVHTDDAGAAVE 307 Mycobacterium t...
WP_011210729 258 -------G----------FEVMYLVSDSD---DARIERLRGALTVLGDSVVVVGDGaG-T-----WSVHVHCADAGAAVE 311 Nocardia farcinica
WP_011559335 237 -------Q----------FEVMYLLGGCD---ADGVEVLRRRLEGLGDSIVIAAAG-G-SgipgqYSVHVHSDDAGGAVE 294 Mycobacterium
WP_011195491 306 LAIQYGDLIDIVIHNMREQHADLLRNAQPAPEGVDAPqaavagvapaaqaeapapeeelPTAVVAVAAGDGMAQIFRSLG 385 Symbiobacterium...
WP_011227781 274 TVARFGRVVRTKVEDMTQQHTEILS--TFGLLAEEVP----------------------PTGLVAVALGHGLARAFRSLG 329 Thermus thermop...
WP_011564349 280 YASRYGRLSGVKVEDMEAQVRSRGEG------AAPEK----------------------NLAAVAVSRGEGNREMFEAMG 331 Rubrobacter xyl...
WP_011728319 306 AGLAVGTLNRIQITALTG-------SGGSRPSGGWER----------------------ERAVLAVVDGDGGAELFAGEG 356 Mycobacterium s...
WP_006769399 317 AAFRAGEVTHLRLEILPEAHST------------EVP----------------------RRVLIAVTPHGSLADLYRSAG 362 Corynebacterium...
WP_009479700 314 AGLSAGRIHGIRVSSFLVDARDQGLLVPPVRTRPDQG----------------------ERGIVAVVAGDGAAELFASEG 371 Rhodococcus
WP_011265725 319 KAFAAGDVSELRLEILPDTSGSF----------TEEP----------------------RRVLMAVAPDGLVAELYRSAG 366 Corynebacterium...
WP_003901506 308 AGLAVGRVSRIVISAL-------GSGTSGLPAGGWTR----------------------GRAVLAVVDGDGAAELFAGEG 358 Mycobacterium t...
WP_011210729 312 AGLAAGTPRGIRIESFDIDGVGPDGGHADDEPEDGPA----------------------DRGVLAVATGADAAALFEAAG 369 Nocardia farcinica
WP_011559335 295 AGLAVGVPTRIQITALAATATTRPQG-------SWSR----------------------ERAVLAVVDGPGAAELFAGEG 345 Mycobacterium
WP_011195491 386 VSQVI-EGG------QTMNP----ST-QDLLDAVERCPSRQVFLLPNN---K---NIILAAEQVVAL---TDKKVYVVPT 444 Symbiobacterium...
WP_011227781 330 A-RVV-AGG------QTQNP----SV-EDLLAAIRSVPNPKVILLPNN---P---NVFLAATEAAKLareAGKEVHVLKT 390 Thermus thermop...
WP_011564349 332 ALVV--EGG------QGANP----SA-ADLLRAVERSGAREVVLLPNN---K---NVVPTAEQVAGM---AEARVHVLPT 389 Rubrobacter xyl...
WP_011728319 357 AHVLRpEAD------EPV------SA-KQLLRALVDVGAAQVMVLPNGyvaA---EELVAGCTAAIG---WGIDVVPVPA 417 Mycobacterium s...
WP_006769399 363 ATVVT-RDTaelteaEPSNE----IV-SEIVAAARATRADEVILLPNGlltK---RELVSIERSSHA---FEQAVTILPT 430 Corynebacterium...
WP_009479700 372 ATVLR-CDD------APVTR-------AQLLGIIRQMGRTEVLVLPNG---AltaQELVAVSAAARD---ARHEVLLLAT 431 Rhodococcus
WP_011265725 367 VKVVA-RNIa----qSKSDD----VV-AKIVSIARKSGADEVILLPNGlltK---RELVSIERSSHA---FEQSVVILPT 430 Corynebacterium...
WP_003901506 359 ACVLR-PGP------DAVTPaadiSA-HQLVRAVVDTGAAHVMVLPNGyvaA---EELVAGCTAAIG---WGVDVVPVPT 424 Mycobacterium t...
WP_011210729 370 AVVLD-DHP------VTS---------AGLLSAIRQMPHREVLVLPNG---AlpaHELVAVGVAARG---EHRDVLLLPS 427 Nocardia farcinica
WP_011559335 346 AHVLL-AEP------D--AP----VTaKQLLRGLVDTGAGQVMVLPNGyvaA---EELVAGCTAATG---WGIDVVPVPA 406 Mycobacterium
WP_011195491 445 RSVPEGISAMVAWMPDEEDgERLFHNMKQAIAAVQTGEVTYAVRDTVYEDLEIRQGDILGLWNGRIRKVGKEPEAVLTEL 524 Symbiobacterium...
WP_011227781 391 RTLGQGLAAAVRYTPEALP-EELLPEMEEAMAGAVTLEVTWASRDAEVEGLKVLKDRPIGLLDGRLVLVGETPEEVVEGL 469 Thermus thermop...
WP_011564349 390 TTIAAGLSAMVGYDPEGEP-EEVVEEMREIVGGLRSAEVTRAVRSARVDGREVPEGAFIGLVDGRLVAVGESVVEVAEQV 468 Rubrobacter xyl...
WP_011728319 418 GSMVQGLAALAVHDAARQA-VDDGYTMARAAAGARHGSVRVATEEALTWAGACKPGDGLGIAGDEVLIVGPDVTAAAAGL 496 Mycobacterium s...
WP_006769399 431 STLVAGIAALSLHDPSQPL-GVDSYAMAEAASAMRTAELRVAGSAALTQAGACSKGDLLAFSGQEILLIAEELNDALSRT 509 Corynebacterium...
WP_009479700 432 SAMVQGLASLAVHDPEREA-VDDAFAMSEAAAATRWGSLRIARERALTYVGTCEPGDGIGLMGHEVIVIEPDAVAAGRRL 510 Rhodococcus
WP_011265725 431 ATLVAGLAAVSVHEPAQPL-AVDSYAMAEAAGSMRTATIRAATSAALTQAGACSKGDLLSFIGPEIALVSEELNDALSRT 509 Corynebacterium...
WP_003901506 425 GSMVQGLAALAVHDAARQA-VDDGYSMARAAGASRHGSVRIATQKALTWAGTCKPGDGLGIAGDEVLIVADDVAAAAIGL 503 Mycobacterium t...
WP_011210729 428 GSMVQGLAALAVHDRARIA-VDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCAPGDGLGLVGHDVVVIDRDVPGAGRTL 506 Nocardia farcinica
WP_011559335 407 GSMVQGLAALAVHDPARHA-VDDGYTMARAAAAARHGAVRVATEEALTWAGACRPGDGLGISGDEVLIVGPDVTAAASGL 485 Mycobacterium
WP_011195491 525 LEAMVAEaGGEVIAVYYGNGINAE-R----AEAVAEQLRERFPDHEVEMQYGGQPLYHYVFSLE 583 Symbiobacterium thermophilum
WP_011227781 470 V-RMARE-GKEVLTLFLGPNTPKE-K----AQG----VAQKFPELAVEILPGGPDLYAYLGVLE 522 Thermus thermophilus
WP_011564349 469 CRGLVGE-GAELITLLLGEGLDEE-E----AGLLAERVRALDEELEVEVKRGGQPLYPLQVVAE 526 Rubrobacter xylanophilus
WP_011728319 497 IDLLLAA-GGELITVLTGHGVDSA-V----GEALQAHVHDKHLGVELVTYHTGHRGDALLIGVE 554 Mycobacterium smegmatis
WP_006769399 510 CLRLLDG-GGEQVTLLIARDREKDfD----EDTFRRGLGT-HSRVDLTVYPASGMENLVEIGVE 567 Corynebacterium efficiens
WP_009479700 511 VDLVLGA-GGELVTLLMGSEAPDG-L----DTELADHISQRHPGVEVMIYHGGQPGDLLQLGVE 568 Rhodococcus
WP_011265725 510 ALRLLDG-SSEQITLLIAQDRQSAfD----EDVFRRGLGT-HTDVEITVYPATGMENLVEIGVE 567 Corynebacterium glutamicum
WP_003901506 504 VDLLLAS-GGDLVTVLIGAGVTED-V----AVVLERHVHDHHPGTELVSYRTGHRGDALLIGVE 561 Mycobacterium tuberculosis complex
WP_011210729 507 LDRMLGL-GGELVTLLLGADADPG-L----AEELCAHIEAGFPGVEVVVYPGGQRGDLVQIGVE 564 Nocardia farcinica
WP_011559335 486 IDLLLLS-GGELVTVLTGHGADGA-VgtdiGAALREHVHHRHLGTELVTYHTGHRGDVLLIGVE 547 Mycobacterium
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