Conserved Protein Domain Family
GldK_short

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TIGR03529: GldK_short 
gliding motility-associated lipoprotein GldK
Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldK is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldK abolish the gliding phenotype. GldK is homologous to GldJ. This model represents a GldK homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture than that found in Flavobacterium johnsoniae and related species (represented by (TIGR03525). Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Statistics
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PSSM-Id: 274632
Aligned: 3 rows
Threshold Bit Score: 650.834
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EAY26209                             6 KFLSYALIASSVLFLQGCFLFGKKGDPNSLESRingsAGEIIPFEQvRSDYSQYVPSGMVVVPNGTFHMGQADEDVPATQ 85  Microscilla marina ATCC 23134...
WGS:AAXU:1101174000288_ALPR1_20573  15 RLLPITLGLAVATLLPGCGLFNKKGSASEKANR----RGEVTGVPK-RESWQQNLPVDMVPIKAGTFWMGQSDEDIAYTQ 89  Algoriphagus machipongonensis...
WP_011583579                         2 NKVSV-IGKRFAIIASLAGLFLAQSCGKGPADG----GGDLVGVAG-RESWVQTVPYGMVVCPSGTFHMGQADEDVPATQ 75  Cytophaga hutchinsonii...
EAY26209                            86 INLNKQITISAFFMDQTEVTNNQYRLFTDVLLaysEGRQAQGEE----LPQEYqegvmdklflkngtpvrpdsikVMNEM 161 Microscilla marina ATCC 23134...
WGS:AAXU:1101174000288_ALPR1_20573  90 SSMNKQITISEFFMDKYEVSNNKYRQFLEAVK---SGQLETGTPttlkEPPTF----------------------DLEEL 144 Algoriphagus machipongonensis...
WP_011583579                        76 INLNKQVTIGGFYMDETEITNNEYRQFMNVML---EDSVAT-------LGEEY----------------------IMTEL 123 Cytophaga hutchinsonii...
EAY26209                           162 YPDTTRWSTEYAHHMGDPLMEYYFMHPAFDDYPVVGVDWQAANFFCQWRTMHLNYyrhtVEGDPYPAPRFRLPTEAEWEY 241 Microscilla marina ATCC 23134...
WGS:AAXU:1101174000288_ALPR1_20573 145 KPDTTVWSTSFSYHYGDPLMEFYFDHPAFDNYPVVGISWNQAKQYCEWRTYHMRA----NDESQYDMTPFRLPSEAEWEY 220 Algoriphagus machipongonensis...
WP_011583579                       124 YPDTTVWVRDFSHHMGDPMMEYYYAHPAFDEYPVVGVDWWAAKYFCEWRTQHMNNw--rAENGLWQMPRFRLPSEAEWEY 201 Cytophaga hutchinsonii...
EAY26209                           242 ASRGGRDMAKYPWGSPYLRNTLGCMLANFKPGRGNYYDDGFAYTGPVAQYFPNDYGLYDMAGNVAEWVLDAYFESSVPVV 321 Microscilla marina ATCC 23134...
WGS:AAXU:1101174000288_ALPR1_20573 221 AAKGGKDVAKYPWGGPYLKNKRGCLMANFKPGRGNYIDDGFPYTAPVDVFAPNGFGLYNMSGNVAEWVLDAYAATSSAIT 300 Algoriphagus machipongonensis...
WP_011583579                       202 AARGGRDMAKYPWGNPYIRNSKGCMLANFKPGRGNYYDDGFMYTSPVASYFSNDFGLYDMAGNISEWCEDAYYDAAVPIV 281 Cytophaga hutchinsonii...
EAY26209                           322 WDLNPVYNPPitkagkNDVninnRRVIRGGSWKDIAYYCETGARTFQHWDSSSTSIGFRCAMTYLGRSSG 391 Mic...
WGS:AAXU:1101174000288_ALPR1_20573 301 WDLNPVYEDP------NEP----RKIVRGGSWKDIAHYLETSTRTYEYEDVAQAHIGFRTVMTFIGRSGS 360 Alg...
WP_011583579                       282 WDLNPTYYND------DEV----RKIIRGGSWKDIAYYLETGTRTFEYQDTSKSYIGFRTVMTYLGRSSG 341 Cyt...
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