Conserved Protein Domain Family
GldK

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TIGR03525: GldK 
gliding motility-associated lipoprotein GldK
Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldK is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldK abolish the gliding phenotype. GldK is homologous to GldJ. There is a GldK homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture and is represented by a separate model. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Statistics
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PSSM-Id: 274629
Aligned: 5 rows
Threshold Bit Score: 828.733
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EAR00567       1 MKKLLLSSIa-----FVFLLTSCGS-KTKGELTGVQGKK-WYPEKPYGMELIPRGSFIMGKSEEDQAKVLNAPTKTVTVR 73  Maribacter sp. ...
EAR13264       1 MRKVLVFAL------LVVIIYSCGS-NDRGELVGVKAKKeWFSEKPYGMVLVPGGSFTMGKQDEDISGAMNAPTKTVTVR 73  Polaribacter ir...
EAS71407       1 MKLYFTFFKgfcfafIALLVLSCGK-SDKGQLVGVEGKR-WYPEKPFGMVLVEGGSFIMGKSDDDLASVQNAPPKTVTVP 78  Psychroflexus t...
WP_011710861   1 MKKYISLIA------VLALLSSCGG-GDRGQLVGAEGKK-WNPEKPYGMTLIPGGAFVMGKSDDDIAGQKNAPPKTVTVR 72  Gramella forsetii
WP_012023929   1 MKKFIAFAA------MLTLVIGCGKsGDKGELVGVTGGK-WHPEKPYGMTLVPGGSFIMGKSDGDLANVEDAPTRTVTVR 73  Flavobacterium ...
EAR00567      74 SFYMDDTEITNSEYRQFVEWVQDSITRTRMAILADELGL-----GP----DDG-G--IGEYAFKDAD-TTKASVYDKYML 140 Maribacter sp. ...
EAR13264      74 AYYMDETEITNNEYKEFVRWVRDSIVRTKLGEQADYAAIvgsnaVP----GAGsTggIQDYAFSSVE-SENATPYQKYMY 148 Polaribacter ir...
EAS71407      79 SFYMDETEITNSEYRQFVSHVRDSVIRQKLAEAAELAGD-----GD----GNN-NrsVQNFAFKNTNsDDDLSPFQEF-- 146 Psychroflexus t...
WP_011710861  73 SFYMDETEITNSEYRQFVDYVKDSIVRVELAKMAELQGA-----TP----GDD-A--IGEYAFSDAE-EGNMTPYEEYML 139 Gramella forsetii
WP_012023929  74 SFYMDETEITNSEYRQFVEWVKDSTMRVRLAILADETGQ-----KStgdkGKK-GgsIADYAFNDSE-PDKMTAYDKYMY 146 Flavobacterium ...
EAR00567     141 DNYSGMGEtG--YEGRGLNKDIDLIWDVSEYPDEYYTEVMvDSLYIPEEESYNGQRTFDVTKLKYKYSWMDIEAAARSRt 218 Maribacter sp. ...
EAR13264     149 ENYWSLSE-Gt-AAARPLNWKTELVWKTSEYPDANYVEVM-DSLYLGEKESVNGLRSFDTKAIKYRYSWFDGDKAARSG- 224 Polaribacter ir...
EAS71407     147 SRYY-----D--PLDQALNWNTEIIWDPAQYPDEDYVYVM-DEFYLSNDQSYNGRRMLDVTKFKYSYKTIDLDAAARAK- 217 Psychroflexus t...
WP_011710861 140 NSYGQGGPtDd-YANRKLNKDIDIVWDTNDYPDVYYAEVM-DSMYIPMDEVYNGQRTIDVKKLKFRYSYMDIQSAAKTQ- 216 Gramella forsetii
WP_012023929 147 DNYYSVGTkDdpYAGRKLNKKVKLIRDTKAYPDEYYAEVM-DSMYLPIEESYNGLRTIDVNKLKFRYSWMDIQAAAKAKv 225 Flavobacterium ...
EAR00567     219 GSRKDFIIQEELEIYPDTTVWIRDFEYSYNEPMHNDYFWHDAYSDYPVVGISWKQAQAFCNWRTKFKNDDQK--SKGKQF 296 Maribacter sp. ...
EAR13264     225 GSRKDFLQTEVVQVYPDTTAWVKDFNYSYNDPMHQDYFHHQSYGDYPVVGVTWGQARAFCNWRTKKKNDYLKg-KKNPTT 303 Polaribacter ir...
EAS71407     218 GVRTNFITEEEVMVYPDTTVWIKDFNYSYNEPMHNDYFSHTAYDNYPVVGVTWGQAKAFANWRTKYLNDFRK--QKKEAN 295 Psychroflexus t...
WP_011710861 217 GKRSNFIKTEEVSIYPDTTVWIKDFNYSYNEPMHNDYFWHSAFDDYPVVGVSWKQARAFTQWRTKYHNDFRR--EKGNAN 294 Gramella forsetii
WP_012023929 226 GKRKDFVKTEQVNVYPDTTVWIKDFAYSYNEPMHNDYFWHKAYGDYPVVGVTWKQAKAFCAWRTLNKNSYIKskKKGRDL 305 Flavobacterium ...
EAR00567     297 VNKFRLPTEAEWEYAARGGIEGGTYPWGGPYVISDTGCFMANFKPQRGDYAADQALYTVEAKSYEPNDFNLYNMAGNVSE 376 Maribacter sp. ...
EAR13264     304 VPTFRLPTEAEWEYAARGGLEFATYPWGTGGTTNDRGCFLANFKPVRGNYAADGALYTMEANSYNANDYGLFNMAGNVSE 383 Polaribacter ir...
EAS71407     296 VNFFRLPSEAEWEYAARGGIEGGTFPWGGPYAKDDRACFLANFKPYRGDYAADEALYTVESDAYEPNDYGLYNMSGNVAE 375 Psychroflexus t...
WP_011710861 295 VPTYRLPTEGEWEYAARGGLEGATYPWGGPYTLNDRGCFMANFKPLRGDYAADQALYTVEAKSYDPNDYGLYNMAGNVAE 374 Gramella forsetii
WP_012023929 306 VNAFRLPTEAEWEYAARGGLESATYPWGGPYTKSDRGCFMANFKPNRGDYAADEALYTVEAKSYEQNGYGLYNMAGNVSE 385 Flavobacterium ...
EAR00567     377 WTNSSYDPSSYDYVSTMNPNGGDGSNARKVIRGGSWKDVAYFLQVSTRDYEYADSARSYVGFRTVQDYMGEEDS 450 Maribacter sp. HTCC2170
EAR13264     384 WTNTAYNLSSYYMASTMNANVEDSQNTRKIVRGGSWKDVAYFLEVSSRDYEYADTARSYIGFRTVQDFIGTANK 457 Polaribacter irgensii...
EAS71407     376 WVNTSYDPASYEYMSSMNPNVNNSENKRKVVRGGSWKDVSYYLQVSTRDYEYSDSARSYIGFRTVQDFLGNSLY 449 Psychroflexus torquis...
WP_011710861 375 WVDSSYDPGSYEYMSTMNPTVNNPEDRRKVVRGGSWKDVAYFLQVSSRDYEYMDSARSYVGFRTVQDYLGTDVT 448 Gramella forsetii
WP_012023929 386 WTDSAYNPNAYEYVSTMNPNVIDGNNQRKVVRGGSWKDVAYFLQVSTRDHEYADSARSYIGFRTVQDYMGTQVT 459 Flavobacterium johnso...
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