Conserved Protein Domain Family
GldN

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TIGR03523: GldN 
gliding motility associated protien GldN
Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldN is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldN abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein also include those which are not believed to express the gliding phenotype, such as Prevotella intermedia and Porphyromonas gingivales.
Statistics
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PSSM-Id: 274628
Aligned: 7 rows
Threshold Bit Score: 298.966
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EAS71404                             6 YSNLKFFLYS-A--IVLSSssaLAQSSNILNASEPSQVGvltESQKISDDDKPLEYGYIGDRDIL-WSKIVWEKIDLKQR 81  Psychroflexus torquis ATCC 700755...
EAQ40618                             3 RNCILVFLFC-LsaSFVNA---QANVLNAKSAGEIGKRS---TERLEADNDGPIPYGYVDDRDIM-WSKVVWEFVDLNQK 74  Polaribacter sp. MED152...
EAM62813                             1 MKKLLVAIFA-F--SMLLS---FQSVAQIIDEAPIDGLF---PEESWSVDVKPIPFPTIRKADVM-WSKRIWREIDFRQK 70  Chlorobium phaeobacteroides BS1...
WGS:AAXU:1101174000288_ALPR1_20558   5 LPKLILSLLV-A--VLIAP---LASVAQVPTSVTPSGYG-----DRTFDMDTVFSVKRIREDDKM-YQVGVWRRIDLREK 72  Algoriphagus machipongonensis...
WP_014709417                         1 -MKRIFLIVCvAa-VAIST---FAQPARRRAEQQKGTRSn--ANTITTRAQISFPTSAPMEEDVV-WRRDIYRELNLVED 72  Prevotella intermedia...
WP_005874243                         4 FKAVIGAILA-At-VSISSvaqENTNNRSPQVGRAPRNTeveQTTTLSNRAQEFNRRLTQKTDNApWRRVVYRRVDLMEE 81  Porphyromonas gingivalis...
WP_011583582                         4 FSVIVSIIFC-AvaSIAHA---QETPAKQWEDPYATGFN-------------KYSVRPIHTSDIM-YKKTIIRAIDLREK 65  Cytophaga hutchinsonii...
EAS71404                            82 INFPLLYPTQDGafpRGRRSLYKVLLDAIEEGsvdstStsaITEVYA--TSYFnkrktyadilsstkslflpdvaldvlg 159 Psychroflexus torquis ATCC 700755...
EAQ40618                            75 INLPYYFPIDTTsisSDRRSLFDTLIKGIRQG-----K---IKEAYT--DSFF--------------------------- 117 Polaribacter sp. MED152...
EAM62813                            71 FNQKFYYPLDVQ---QNWKSFIMVILDALKES-----G---HFTAYD--LTXTdellv---------------------- 115 Chlorobium phaeobacteroides BS1...
WGS:AAXU:1101174000288_ALPR1_20558  73 YNLSLYGAGD-----AKKNGIIDYIYKAVVDE-----N---ALEVFA--DEEF--------------------------- 110 Algoriphagus machipongonensis...
WP_014709417                        73 ANAGLYYPTEPV---GSQMNLFCYIFKLMMMG-----PrnggISAYEyrMDGNevf------------------------ 120 Prevotella intermedia...
WP_005874243                        82 SNAVLYYPPRPI---GDRKNLFSTIFGLINSN-----S----LDVYEy-LDGFeaf------------------------ 124 Porphyromonas gingivalis...
WP_011583582                        66 QNLPLF---------SRNRELPRLIIDATLAG-----L----ITPYA--NDSLengsklside----------------- 108 Cytophaga hutchinsonii...
EAS71404                           160 qygvtgtenvqtfinRSLVgklseFPQLYSQELVAKMEPF---------LIPTAITSRDILEYHIKGMWYFDKLQGEMKY 230 Psychroflexus torquis ATCC 700755...
EAQ40618                           118 ---------------TSKI-----TQDEIETRLVNIRDENg-------yVDTFNLQTEDVAGYMLKGMWYFDKRQGEMKY 170 Polaribacter sp. MED152...
EAM62813                           116 -----------pitfNEVVgrqtdTLHQMGRRPYPAYEEYd-------tVIITSFDPTKVMRLRVKEDWYFDKQRSQMMV 177 Chlorobium phaeobacteroides BS1...
WGS:AAXU:1101174000288_ALPR1_20558 111 ---------------TEPL-----SIAEFQDNFWLNAT-------------GDSIFMKQLYYLDFREDFVFDKHHSDMVF 157 Algoriphagus machipongonensis...
WP_014709417                       121 -------------tdSARI-----KPLQFLDNYHVYYERTdrg----irLDNSDIPSAEVKGYYLKESAYYDQGTSTFHR 178 Prevotella intermedia...
WP_005874243                       125 -------------tdQYKI-----KFQEFLDRFGIYYQPStnknaelfkVADSDIPSAEVKAYYVKEEWYFTPTNSDVDI 186 Porphyromonas gingivalis...
WP_011583582                       109 ------fnallimpsDQPVytpedTLMMFQNEDYSYRTTS---------LGGDSFFPTDIYQMEIKEEWLFDKQRSRQYF 173 Cytophaga hutchinsonii...
EAS71404                           231 RLLGI---APAGFDIqsQ--NQSFSGNPQIVPYFWVWFSDARQVLH-SAKVINNNNSSMPFSFDHLLNSRRFDAFIYKTQ 304 Psychroflexus torquis ATCC 700755...
EAQ40618                           171 RLLAL---APMGKDVqtL--GVENIEDDNLYELFWIFFPDAREVLH-DSKVFNPMNAAQPISYDHLLNARRFNSVIVREE 244 Polaribacter sp. MED152...
EAM62813                           178 RIIAL---CPVMIK--------ERDGQEVTEPMFWISYAQAREVLA-QALVFNEFNSAMRLTYDELFWKRLFDSYIYKEQ 245 Chlorobium phaeobacteroides BS1...
WGS:AAXU:1101174000288_ALPR1_20558 158 DIKYLelvMPSETNSd----AGQKTIAFIRYKDFY-NYFKDHP----EARWINFKNLSKSLTYDEAFESRLFKSVVRKFT 228 Algoriphagus machipongonensis...
WP_014709417                       179 KVIAL---CPIMYRA--D----DFGDGEVKYPLFWVKYDDLAPFLSkQTIMTSNLNNAATMSVEDYFTMNRYQGKIYKTN 249 Prevotella intermedia...
WP_005874243                       187 KIQAI---CPIMT-------GQDEFGEVRNQPLFWIPYENIRPYIArERVMLSSLNNTRNSTIDDFFRLNLYKGDIVKTE 256 Porphyromonas gingivalis...
WP_011583582                       174 DIDAItfyVPADHPS--NikGIQYAIASFSYKELCEKLFKDNP----KAIWFNPQNEREHKNLADAFDLRLFSSYIIKVS 247 Cytophaga hutchinsonii...
EAS71404                           305 NVYeDREISDYI----QDNALLQLLESNRIKEGIRNFELDMWNY 344 Psychroflexus torquis ATCC 70...
EAQ40618                           245 NIYgNRAIEDYI----RGNSLFQLLEANKIKEDIRNREIDMWNY 284 Polaribacter sp. MED152
EAM62813                           246 NVY-DRRINSYA----TGVD--ALLESERIKREMFRFEEDLWQY 282 Chlorobium phaeobacteroides BS1
WGS:AAXU:1101174000288_ALPR1_20558 229 NPD-NALVADLVdpdnPNPEVQAYLNSLAFEYKLLEYESNLWEW 271 Algoriphagus machipongonensis
WP_014709417                       250 NML-GRTLSQYC----TTDSAMT-KEQRKIENELLAFEKNIFgd 287 Prevotella intermedia
WP_005874243                       257 NLH-NRALAEYC----PTPDSMK-MESKRIDKELQGFRDGLFvt 294 Porphyromonas gingivalis
WP_011583582                       248 NPK-DSYLTDIY----GGDQLKGLMASQWAAFELLEYEHNLWEF 286 Cytophaga hutchinsonii
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