Conserved Protein Domain Family
HpnM

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TIGR03481: HpnM 
hopanoid biosynthesis associated membrane protein HpnM
The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins are members of the pfam05494 family of putative transporters known as "toluene tolerance protein Ttg2D", although it is unlikely that the members included here have anything to do with toluene per-se.
Statistics
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PSSM-Id: 274599
Aligned: 8 rows
Threshold Bit Score: 224.952
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011381847  18 NMKILSALKSLLqlqiivlmllaaspswsETQESGTPEQVVKQLQ--EALIKAMREGAKLG--YEGRYELLAPVINQTHD 93  Nitrosospira mu...
WP_002810153   9 ILAIFAGIAPVI-----------------PSAAAEQPSSTVERLH--NTLLAVMKEAEALG--FGGRYQKLLPVISEEFD 67  Nitrosococcus o...
WP_012536982  10 LACTVGGIAPVLsaaavtva-apttssdgAPAVGSTPEATINTLD--GVLLKSMQGGRRLG--YSGRYRIVAPVVQKVFD 84  Acidithiobacill...
WP_010960131   1 mpmvrnpmflrmlgglalalmlsagrvatADTGTEAARAVVDKLN--GALIDVMRNAKQLG--YQGRYKKLDPIVREVFQ 76  Methylococcus c...
WP_011385845  11 ALVLWSGLAEP------------------AAAQAGGPEAVIRTFS--DRLLESMKGGAKLG--FKGRAEKMRPAVAEAYD 68  Magnetospirillu...
WP_011240742   9 IPAVLVTVAPVAa----------------FAQASDPAATQIDAYH--NAIIEIMKQGKSLG--ISGRITRFETLVHDYYD 68  Zymomonas mobilis
WP_011387817  14 VFPLIFGVLLVFs---------------qAVRADETPSQRIEAYH--GTLLQVMKEAKTLG--VAGRFDRIDPAARATFD 74  Rhodospirillum ...
WP_011252193  34 SACLLTGPVAMTalsp---------aalaQTAGAASPADAASAVTpiSALYDALKAAQKTGktAQQRATMIAPAVDRAFD 104 Gluconobacter o...
WP_011381847  94 LDFIARTSLGANWTQLSAEQQRTFTDTFRKLSIATYASQFKEYDGERFESLER-QSMPREQVMIRSKLI-Q-SGGEPVRF 170 Nitrosospira mu...
WP_002810153  68 LPFVAHYTLGSSWDELSGEQQHQFIETFRELSVVDYARNFDGYSGQHFTIEEE-TPLPRGRVRVRSKLIdP-NGGSSVVF 145 Nitrosococcus o...
WP_012536982  85 YRRIAALTLGDYWQKLSPEQQNEFVGVLADLTAATYAARFDSYNGEHFAIVGS-QALQPGAEGVFSTFT-E-HNGKVHRF 161 Acidithiobacill...
WP_010960131  77 FEAVAQIALGAHWKTLNDDQKREFVKKLTELSIATYAAQFNSYAGEQFQYDSD-QAVKPDRVVVRYKMV-A-PKETPVKF 153 Methylococcus c...
WP_011385845  69 MPSMTRSTLGTAATKMSPDEAGKLAQAYSNFSVATYAAQFNEWNGERFEVGEQ-RPSAGGSVIVSSWLV-P-KNGDPTQI 145 Magnetospirillu...
WP_011240742  69 MPTMTSLVVGSGWSSASQADRDQAIAALEHHSAVMLASNFVSYGGEQFKTELP-VTSRGSDKLVRATIT-S-D-----KL 140 Zymomonas mobilis
WP_011387817  75 FDRMAALVAGPSWRDASAAARARLTEAFTRMSVMTYAKRFTGYSDERFETLGE-EPGPRGTTLVRTHIV-S-SSMEAVDL 151 Rhodospirillum ...
WP_011252193 105 LEAILRRSVGVRYNSLSPSDRTRLLGSFRQFTIARYASSFKPEAQAAFTVNPQtRPNPTGGLIVDTTIG-GtDGGDVTPI 183 Gluconobacter o...
WP_011381847 171 DYMLRQGKDG-WRIVNILADG-VSDLALKRVEYRAILQRDGFPKLLDMLQQKIEQAGK 226 Nitrosospira multiformis
WP_002810153 146 DYLLHKADNQ-WQIVNVIANG-VSDLAVKRAEYRHIIKAEGFDSLLSKLKEKIALYCQ 201 Nitrosococcus oceani
WP_012536982 162 DYILQKDGDF-WRIVNVVADG-VSDLSLRRAEYTETMQKKGFAALIAHLKAQIAGYAK 217 Acidithiobacillus ferrooxidans
WP_010960131 154 DYMVNQFDGK-WEIINIVVDG-ISDLALKKAQYTSVIDREGFDVLMSKLTQKITDYAN 209 Methylococcus capsulatus
WP_011385845 146 DYVMRQDQGQ-WRIIDVLFEGtVSQVAVRRSEFGSIFRSKGLDGLIETLEKQTAALDK 202 Magnetospirillum magneticum
WP_011240742 141 IYRMRFSQGK-WRIVDIISDG-VSQLAVQRADFSSTVASNGIPGLVHKLATIDAKTMK 196 Zymomonas mobilis
WP_011387817 152 IYVMVGGKGApWRVVDILLKGsISELAVRRSEYAALLSSGGVDALSQALETQTAALLK 209 Rhodospirillum rubrum
WP_011252193 184 DYIMTNGTSG-WRITDVLLNAhISQVAAQRADFGEALSQGGASGLADHLDSKTAHFLH 240 Gluconobacter oxydans
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