Conserved Protein Domain Family
HpnE

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TIGR03467: HpnE 
squalene-associated FAD-dependent desaturase
The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.
Statistics
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PSSM-Id: 274593
Aligned: 14 rows
Threshold Bit Score: 388.261
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015895980  20 SAACALSDAG------YRVQLLERRPYVGGRASSYEHPGTG----EVIDNCQHVLIGRCTNLIDLYARLGVPNAIR--W- 86  Acidobacterium ...
WP_011122224  16 SAAEALSRTGvfhrgeMQVVVAESRRNTGGRAGSFVESRSG----QTVDYCQHVAMGCCTTLLDLLQRMGLLDRFQ--C- 88  Rhodopirellula ...
WP_011479692  20 aaaVRLTQAG------FKTTLFDASHQLGGRARSITWQGLS------LDNGQHILLGAYASSLELLQTCGVEIRTSl-L- 85  Methylobacillus...
WP_010034634  29 aaavglagRG------FKVTVLESRNRLGGRAGSFRDPQTD----QLVDACQHVSMGCCTNFAHLLRTVGAEHLLS--P- 95  Gemmata obscuri...
WP_011685297  15 aaaaalgRDG------WEVDLFEARPFLGGRATSYAVPSGGdeiaETIDNCQHVLLRCCINLLDFYQRLGVRDRIKf--- 85  Candidatus Soli...
WP_011239663  38 ACAVELARRH------VPVTVFERSHTLGGRARVVAKDGWR------VDNGQHILIGAYTELTRLLRLTGGSPKLl--E- 102 Aromatoleum aro...
WP_011511128  16 SAGVRLADAG------CLVRVHEAAQQVGGRCRSYFDGATS----LTIDNGNHLVLSGNHSLLAYARRIGTEAGLQgpP- 84  Nitrobacter ham...
WP_011288435  14 aaaVELTTAG------AETTLFEAGRVLGGRARGVEIDGRQ------LDNGQHILLGAYRDTLALMRRVGANPDELf-D- 79  Dechloromonas a...
WP_011312210  16 aaaLTLAEAG------VPVTLYEAGRVLGGRARAVELG--D----RVLDNGQHILLGAYTNTLELIARVHPAPRTPplW- 82  Thiobacillus de...
WP_011387824  24 ACAVRLVSHG------RAVSLHEAAGQAGGRCRSFVDASLD----RLIDNGNHLLLSGNRAVNAFLATIGASDRLDg-Pe 92  Rhodospirillum ...
WP_015895980  87 YNQFTFVEPGGRES-VLRSTG-L-PAPMHSSLSFLAAKCFTVADKIAIARGLLAFVW-GlP--PDSGENFGAWLTRHGQT 160 Acidobacterium ...
WP_011122224  89 YSELTFYHPQHGFS-RFRPSR-WlPPPLHLSSALSSLKHLSRKNQREIRAALWRLMRtPeS--ELIDVTASVWLQANGQS 164 Rhodopirellula ...
WP_011479692  86 RLPLKLEIPHEF---SLRSMPaL-PAPWHILGGLLQAQGLSFQERLAAVRFMASLRLqRfR--LPTDMPLHQVL--ASQP 157 Methylobacillus...
WP_010034634  96 QPRLYFVTPDRRVS-VFKSDP-W-PAPFHLGRALMGAHYLTPLDKLRVAYGLGRMLLe--R--PDADPPLLPWLKAHFQN 168 Gemmata obscuri...
WP_011685297  86 YREFFFIEPGGRIS-VLRRGK-L-PAPLHFTESFLGMHFLSFADKVGIGKALLALRReRnRrkDLDRISMLDWLLQKRQT 162 Candidatus Soli...
WP_011239663 103 HLPLTLHTPGHMH---LQAAR-L-PAPLHLAIGLLRATGLGWADRLAMLRLMRFLKKqRfR--VEAQLTVAELLRDTRQS 175 Aromatoleum aro...
WP_011511128  85 KAEFQFIDLAVNKRwKLQIND-G-RVPFWVFDRSRRVPDTSPADYFALAPLVWAKTRtR----------VGDVIKCEG-- 150 Nitrobacter ham...
WP_011288435  80 RRPLQVIDNTGF---RLALPR-L-PAPLNVAWGLLAASGVGMGEKLRTALWMDGIKRrGfK--LAYETTVAQWLDDAGQT 152 Dechloromonas a...
WP_011312210  83 RLPLAFDQPPDF---RLRCPR-L-PAPLHLAAGLLGARGLDWHEKLTAARWAAALIRg--A--ATPPGTVSELTR--GQP 151 Thiobacillus de...
WP_011387824  93 RARFPFLDVETGERwCLTPSA-G-PVPWWLLRADRRIPGTRARDYLEGLKLA--------R--ASDADRVADLLT---PG 157 Rhodospirillum ...
WP_015895980 161 HGAIERFWKPVLVSALNEDPERISVHYAAKVFRESFL-SSARAGEMGIPSIPLSELYGH-AIDYITARGGEVRLRTSVES 238 Acidobacterium ...
WP_011122224 165 EDTLERFWDVILISALGDIPKRVSMAAARKVMIDGFA-GARHASDVWVPRRPLSEIFGDgFRKPLDQRGVAFELGHAVRE 243 Rhodopirellula ...
WP_011479692 158 TRLITVLWEPLCLAALNTPIATASAQAFLNVLRDSFA-HKKSDSDLLLPRADLTTLIVEpAANFIQSHGGRVNLNAPITS 236 Methylobacillus...
WP_010034634 169 ERTINRFWAIVLTSALNETVDRVGLKYARKVFRDGFV-RHRDAFTVHVPSVPLGRLYGDeLRGWLATHGVEVCENAGVKR 247 Gemmata obscuri...
WP_011685297 163 PHAIDRFWRQVLVSAVNEDLDRMAAIHGFQVFWLGFL-ASADGYEMGVPNVPLGDLYTAeAWRRL----GNVRMHFRAPV 237 Candidatus Soli...
WP_011239663 176 ERLSRLVWEPLCVAALNTPVAEASAQVFASVLRDSLA-AGASASELLIPRVDLSELFPVpAARYLAVRRGKLRTGTAVEA 254 Aromatoleum aro...
WP_011511128 151 -ALYKRLMLPLLLAALNIEPPDGSAGLAGAIIRETLL-AGGQACRPLIARDGLSSVLIEpAIDYIRARGGSVDVGHEVRQ 228 Nitrobacter ham...
WP_011288435 153 GALRRHLWEPLCLAALNLPAERASAQLFANVLRDSLGsSRREDTDLLLPRVDLGQLLPEpAGHWLRSHGAEIRLSTRARE 232 Dechloromonas a...
WP_011312210 152 EKLRALLWHPLCISALNTPPETASAAVFASVIRAAFG-GRNAHSDLLLPRSDLGELFPVpAARRIVDAGGVVRLACRVSG 230 Thiobacillus de...
WP_011387824 158 TPLYRRFWAPLTVGVLNAAPEEAAAALLWPVIKETFG-RGEAACRPRMARNGLSDSFVTpALAWLTARGAEIAFNHRLRA 236 Rhodospirillum ...
WP_015895980 239 IACSGTENRWRV-LSADET----FDADAVVLALPFEGMARL-LPqmpdapgkE----T----LGAKLAAFEHSPITGIHL 304 Acidobacterium ...
WP_011122224 244 LNWNAESNRWTIeRSGAES----LLADHVIVATPWHVSRRW-FP--------E----I----WGEQSTSFSSSPITGLHL 302 Rhodopirellula ...
WP_011479692 237 LHAQDHGVRLKS-RTEEQD----FT--HVVIATSPFRVAPL-LQtlp---smE----D----IIAQCQALQYQPIYTVYL 297 Methylobacillus...
WP_010034634 248 LLKGEGISGAAL-R-DGST----LTADWYVLAVPFDRVADL-LPg-------ElageP----YFGGANGLTPSPITSVHL 309 Gemmata obscuri...
WP_011685297 238 ERIDGTGFMV-----GGEH----LTADRYICALPFERMESVgLPa-------P---------------KLEHSPITGIHL 286 Candidatus Soli...
WP_011239663 255 IRPVAGGFRLEG-DPADQR------YAHVVVAAAPHHAGAL-LAp-------L----DgcarLAAKIDALSSEPITTVYL 315 Aromatoleum aro...
WP_011511128 229 LTMANGKVTALA-L-GDQTia-lGPGDAVVMAVPPRPAAAL-LPg--------------------LTVPTKFRAIVNAHF 284 Nitrobacter ham...
WP_011288435 233 INAAENGIAIDG-ETFAAA----IIATA------PQHVGAL-WP--------------------AAETNYDYEPIATVYR 280 Dechloromonas a...
WP_011312210 231 LSARADGITTLL-GAGNQT----HAHSHAIIAVAPQHVKGL-AAsis---elG----D----AVAMLAHYDYQPIATGYV 293 Thiobacillus de...
WP_011387824 237 IEYGDGRPAALV-FS-EETplrlGPADQVVLAVPPAVAAGL-LPg--------------------LTVPEGSRCIVNAHF 293 Rhodospirillum ...
WP_015895980 305 WFDREI------TPLEHAVLLDSPVQWLFNKSALQPEHras-geHYIELVVSASRALVPMQRQEIVDLAVAELGRFFPAM 377 Acidobacterium ...
WP_011122224 303 WLDRSL------TPMPHVVMVGTLAQWFFQDPIQTIGNasptegVYHQVVISGQHARSDWPKEKLVSQVVRELSEAFPKA 376 Rhodopirellula ...
WP_011479692 298 QYPSAIa-----LPQAMHGLAGKLGQWVFDRGQLYGQT------GLLAVVISAEGKHQALTQSDLATKIHQELQDVFPRQ 366 Methylobacillus...
WP_010034634 310 WLDRPt------MKLPHAVLVDCLGQWVFDRGEVAPGE------FYLQVVVSAARDLKGLGREEIQRRIYEELGRLFPPV 377 Gemmata obscuri...
WP_011685297 287 WFDREIt-----T-LPHATLLDRTMQWMFNKDGG----------RYLQLVVSASRDLTPLSRKEIIDIAVGDLRLYFPRV 350 Candidatus Soli...
WP_011239663 316 ALGAPLr-----LAHAMIGLVDGPAQWAFDRGRLGGPA------GLIACVISTHGTHEALSREALTLAVHAQLERQLGRR 384 Aromatoleum aro...
WP_011511128 285 RFVPPP------HQPPMMGVVNGLIEWLFAFP------------DRFSITISGGDRLVDMPREELARAIWKDICAVAGIE 346 Nitrobacter ham...
WP_011288435 281 NFEPGMt-----SAFPLSNRLGGHCQWVVDRGQ-----------GVLACVLSGHGDWEKLDDNALATALDQELGLTNPTG 344 Dechloromonas a...
WP_011312210 294 QYAPDFr-----LPKPFLALAEGPAQFAFDRGQSHAQP------GLIAFVASAAADL----PTDWLDRAEAQLRRS---V 355 Thiobacillus de...
WP_011387824 294 RLDHAPegfaddFEGPL-GVIGGTAEWLFVRG------------DVASVTVSAADALAALDPDEIAARIWRDVALALGLD 360 Rhodospirillum ...
WP_015895980 378 REATLVKAAVVKEVRATYSVRPGLDAVRPGAESPWPRMVLAGDWTATG-----WPATMEGAVRSGYQAAEAVTA 446 Acidobacterium capsul...
WP_011122224 377 GMPKVLKSRVVTDPHAVFSVSPETQVRRPASKTSCPGLHLAGDAVATG-----WPATMEGAAISGQLAANSVLE 445 Rhodopirellula baltica
WP_011479692 367 LGTPPLWHKVIAEKRATFACTAGLP--RPVQATPHPRIQLAGDYVSTGdafldYPATIEGAIRSGFQAAENIIK 438 Methylobacillus flage...
WP_010034634 378 AQAKLLRAKVVTEHTATFSAVPGVDRWRPPQASPVWNLAVAGDWTDTG-----WPATMEGAVRSGYLAAEAILA 446 Gemmata obscuriglobus
WP_011685297 351 REAKLVKAHVVKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTN-----WPATMEGAVRSGYIAAEALAK 419 Candidatus Solibacter...
WP_011239663 385 LPAAE-WSQVITEKRATFACRPGLA--RPGPQTPLPGLWLAGDYLDPD-----YPATLESAVRSGVATAARVLQ 450 Aromatoleum aromaticum
WP_011511128 347 AEM-PAW-QIVRERRATFEASPEQNALRPGARTEWKNLFLAGDWTDTG-----LPATIEGSVRSGNRAADLVLK 413 Nitrobacter hamburgensis
WP_011288435 345 ------WHKVIREKRATLSAQPGIH--RPDCRTTAPRIFLAGDYTWAD-----YPATLEGAVRSGRRAAQMAMA 405 Dechloromonas aromatica
WP_011312210 356 RPGRPQWRKRIVEKQATYACRPGMA--RPAVRTRHPRVFLAGDYTAGP-----YPATLESATQSGVQSAASLLE 422 Thiobacillus denitrif...
WP_011387824 361 AAARP-PVRIIKEKRATFAQTPDQLCRRPPTRPPGYGLCLAGDWTHTG-----LPATIEGALRSGEAAADAALH 428 Rhodospirillum rubrum
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