Conserved Protein Domain Family
crt_membr

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TIGR03459: crt_membr 
carotene biosynthesis associated membrane protein
This model represents a family of hydrophobic and presumed membrane proteins found in the Actinobacteria. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Statistics
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PSSM-Id: 274589
Aligned: 5 rows
Threshold Bit Score: 599.458
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011208267  54 AALLGFLGALMITFGGFGAGSVRKRDPLLEALHLSWLRFGHGYALSTIVIWIGVLLMITAWVRLGRTTI--------Gfg 125 Nocardia farcinica
WP_010935196  16 PVGVGIFASILIALGSFGGGAIRNRGGLLESLHVEFLAYGHGAGFSNITLWIGTALYIIAWYLLGRRVM--------Q-- 85  Corynebacterium...
WP_005295989  24 AVWLGLIGSIVLTITSHSVGAVRSRGGIMQVIGLSSFTFGHAAGMMTVVMWFALGAMVLSWIIVGRHIL--------V-- 93  Corynebacterium...
KEI23714      10 PVVLGGLAGILLVLGSFGGGAIRYRDGVLDALGLNFLAFGHAQGISNSVLWVGQLLLIGAWVHLGRRLFkkkvaddtA-- 87  Corynebacterium...
WP_011799247  37 PARLGFAGAVLITAGGLGAGSVRQHDPLLESIHMSWLRFGHGLVLSSILLWTGVGVMLLAWLGLGRRVL--------A-- 106 Mycobacterium b...
WP_011208267 126 erpGHVTLNELRAIVGIWIFPLLFAVPMFSRDAYSYLAQGALLRDGFDPYQVGPVANPGVLLDNVSPVWTTTTAPYGPVF 205 Nocardia farcinica
WP_010935196  86 ---SAVSLRYVTHCIWLWITPLLFAAPIMSRDVYSYLIQGTLLRDGFDAYTQGAAVNPSPILYEVSHDWRNTTTPYGPLH 162 Corynebacterium...
WP_005295989  94 ---HGKPLH--RSAIASWIGPLVLAGPLMSRDIYSYLMQGTLARDGFNAYEVGAAANPGPLLFEVSADWRNTTTPYGPLH 168 Corynebacterium...
KEI23714      88 ---DAVDLGLVKRTLYAMVVPLIFAAPMMSRDVYSYLMQGAMLRDGFDPYTEGAAVNPGPMLLEVSHDWRNTTTPYGPLH 164 Corynebacterium...
WP_011799247 107 ---GEATEFTMRATTVIWLAPLLLSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVGNPNALLDDVSPIWTITTAPYGPAF 183 Mycobacterium b...
WP_011208267 206 LLLGRAITAITGDNVVAGTIALRLVMLPGLALMMWAVPYLTKHLGGKPTVALWLAVLNPLVLIHLIGGVHNEMLMVGLMC 285 Nocardia farcinica
WP_010935196 163 LWLGEWITTVTGNHISIGVLLFKLVSLVGFGAIVWSIPKIAAAIGGNPTFALWLGVANPVMVFHLIGGMHNESLMVGLVS 242 Corynebacterium...
WP_005295989 169 MGVGQAITSVTGDNITAGTLAFKLLSIASVLVMAWAVAKLATHLGVRPEVAVWLGVFNPLSVLHLVGGMHTENMMMALVL 248 Corynebacterium...
KEI23714     165 LWIGDMITTVVGDNVTLGVVAYKILSIIGLAVTGWSIVRIAQHFGVNPAIALWIGVANPVMIIHMIGGMHNESLMVGLVS 244 Corynebacterium...
WP_011799247 184 ILVAKFVTVIVGNNVVAGTMLLRLCMLPGLALLVWATPRLASHLGTHGPTALWICVLNPLVLIHLMGGVHNEMLMVGLMT 263 Mycobacterium b...
WP_011208267 286 AGIALVLERHH---VAG----IVVVAIGVAIKATAGVALPFLVWIWMLHererraaeragrdldatagtaddaakATPDM 358 Nocardia farcinica
WP_010935196 243 IGFVFALRRSPawiFAG----IAVIAVGMALKATAAFALPFVVWIAVAQ--------------------------AGPTL 292 Corynebacterium...
WP_005295989 249 LGCLCAVKLQP---VRGglaaSALIGVATALKATAFIALPFVVWILVARvagplpya-----------agksrwlHLADT 314 Corynebacterium...
KEI23714     245 VGLLLALKKRF---VAG----VALIAVAVSLKATAAIALPFVVWIGMHHfagfla---------------tkkgkDSPTL 302 Corynebacterium...
WP_011799247 264 AGIALTVQGRN---VAG----IILITVAIAVKATAGIALPFLVWVWLRHlrer-------------------------rg 311 Mycobacterium b...
WP_011208267 359 PHPVLTFAKIAGLGLSVFALVFVAASAIAGVGIGWLTALSGSKKIINWLSLPTVMAH-----ATTWITPLRLESVLTVTR 433 Nocardia farcinica
WP_010935196 293 RSRIVRFMIFALVGAVETIAIVALITWASGASSGWIAALSGNTKVINPLAFPSLVATlisgvGSLWLDPFPFNAVVAVIR 372 Corynebacterium...
WP_005295989 315 WRRFGTLVWAGLVSVLACVGVLALVTVLTNQTWGWVTEVTGNSKVINPLALPSFIASslepvLSRINDDLTFNVLVDAIR 394 Corynebacterium...
KEI23714     303 KQQVPAFFATGAAGVAVTGVVVSAITWASGASWGWISEISGNSKVINPLAFPSLVASvitmvAEVFVDDFDYNAVVNVVR 382 Corynebacterium...
WP_011799247 312 yRPVQAFLAAAAISLLIFVAVFAVLSAVAGVGLGWLTALAGSVKIINWLTVPTGAANvihalG-RGLFTVDFYTLLRITR 390 Mycobacterium b...
WP_011208267 434 ALCALALVVVLVATWWRFRHSEREAVFGILIAFVAIVILSPAALPWYYSWPLALAAGFALSTTTLMALVGVCTWLMLVFQ 513 Nocardia farcinica
WP_010935196 373 KISMVFMGLGVIGCWWYFRKSERAAIQGTAAGYMVAFFFNAVTLPWYYTSVVSLIGTFTPPVWLQKLTVMASIIVAFAFT 452 Corynebacterium...
WP_005295989 395 PVSSALMLLGLVATWWLFRHDERTAFTGMAVAYAITCVLNTVTLPWYYTAPLALVVLASQSRMVIYLTSVFCMWVTFMFD 474 Corynebacterium...
KEI23714     383 SISMLIMLGGLVVCWWLFRQNERRAVAGTAAAYAVAFVFNSVTLPWYYASLISLLGTFKPPMWLIRFAAGASVFIALVFT 462 Corynebacterium...
WP_011799247 391 LIGIVIIAVSLPLLWWRFRRDDRAALTGVAWSMLIVVLFVPAALPWYYSWPLAVAAPLAQSRRAIAAIAGLSTWVMVIFK 470 Mycobacterium b...
WP_011208267 514 PDGSIGLYNFW 524 Nocardia farcinica
WP_010935196 453 GSGNHQLYNPV 463 Corynebacterium diphtheriae
WP_005295989 475 GGGNNRLYALW 485 Corynebacterium jeikeium
KEI23714     463 GSGNHQLYNIV 473 Corynebacterium glutamicum ATCC 14067
WP_011799247 471 PDGSHGMYSWL 481 Mycobacterium bovis
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