Conserved Protein Domain Family
ABC_peri_uca

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TIGR03427: ABC_peri_uca 
ABC transporter periplasmic binding protein, urea carboxylase region
Members of this family are ABC transporter periplasmic binding proteins associated with the urea carboxylase/allophanate hydrolase pathway, an alternative to urease for urea degradation. The protein is restricted to bacteria with the pathway, with its gene close to the urea carboxylase and allophanate hydrolase genes. The substrate for this transporter therefore is likely to be urea or a compound from which urea is easily derived. [Transport and binding proteins, Unknown substrate]
Statistics
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PSSM-Id: 213811
Aligned: 10 rows
Threshold Bit Score: 531.648
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011268762  27 KDHFNVCWTIYAGWMPWEYAGSQGIVDKWAKKYGIKIDVTQLNDYVESINQYTAGQFDGCTMTNMDALTIPAAGGVESTA 106 Pseudomonas syr...
WP_011467604  28 KDNFKICWSIYVGWMPWEYGDTSGIVDKWADKYGIEIDVVQINDYIESINQYTAGSFDACTMTNMDALTIPAAGGVDSTA 107 Saccharophagus ...
WP_011138993  31 KSKFQVAWTIYVGWMPWDYAAQSGILDKWAKKYGIEIEMVQVNDYVESINQYTAGKFDGCVMTNMDALTIPAAGGVNSTA 110 Wolinella succi...
WP_011589166  28 KDSFSVCWSIYVGWMPWDYGAQQKIVDKWAAKYDITIDVVQINDYVESINQYTAGAYDGCAMTNMDALTIPAAGGVDSTA 107 Alcanivorax bor...
WP_011093480  27 KTQFNVCWTIYAGWMPWGVIGTQGIIDKWADKYGIKIKVTQLNDYVESINQYTAGQFDGCTMTNMDALTIPASGGVDTTA 106 Pectobacterium ...
WP_010919699  42 kTEYRIGWTIYAGWMPWAYAQQAGIVKKWADKYDVKIELVQINDYVESLNQFSAGKLDGVTATNMDALTVPAAAGKDTTV 121 Caulobacter vib...
WP_011444273  34 RKEFSIGWSIYAGWMPWPYAQQAGIVKKWGDKYGIRINVVQVNDYVESVNQYTAGKFDGVTVTNMDALTIPAAGGKDTSA 113 Novosphingobium...
WP_011399143  21 aDKFKLAWSHYTGWEPWGYAADQGIVKKWADKYGIEIEVQLINDYVESINLYTASDFDAVTATNMDALTIPSVSGVDTQA 100 Hahella chejuensis
WP_011156973  29 KKDFKVAWSIYVGWMPWGYAADTGIVKKWADKYGITIEVKQFNDYVESINQYTAGSYDAVTITNMDALSIPAAGGVDTTA 108 Rhodopseudomona...
WP_011682639  19 KPTFTVGWSVYAGWTPYHYMNKSGVLRKWADKYGITIKVQRF-DYAPSLDAFVARNIDACTMTNMEALDMPAASGVPTTA 97  Candidatus Soli...
WP_011268762 107 LIVSDFSNGNDGIVLKGeGKKVADLKGMDVNLVELSVSHYLLARALDSVKLSE--KDLKVVNTSDADISAAFNTDD-VQA 183 Pseudomonas syr...
WP_011467604 108 LIVGDFSNGNDAVILKD-KKSLKEIKGQQVNLVELSVSHYLLARGLESVGLAE--KDVKVVNTSDADMVAAYTTKD-VTS 183 Saccharophagus ...
WP_011138993 111 LIAGDFSNGNDGIILKG-KKRLSEIKGQKVNLMELSVSHYLLARGLESVGLSE--RDVSVVNTSDADIVAAYSTKE-VSA 186 Wolinella succi...
WP_011589166 108 LIVGDFSNGNDGVVLKG-TDTLANIKGQDVNLVELSVSHYLLARALDTVNLSE--KDLTVVNTSDADMVAAFTTKG-VTA 183 Alcanivorax bor...
WP_011093480 107 LLLGSFSAGNDGIVLKGkGKTLSDLRGMKVNLPELSVSHYLLVRGLETAGLRE--RDVTVVNTSDADIVAAFATRS-VQA 183 Pectobacterium ...
WP_010919699 122 LMIGDYSNGNDGLVLKD-GATLADVKGRPVNLVELSVSHYLLARALEKAGLKM--SDVKTVNTSDADIVAAFGATE-TKA 197 Caulobacter vib...
WP_011444273 114 IIVGDYSNGNDGILLKG-GNSLADIKGRETYLVELSVSHYLLARGLEKAGLKP--TDVRTVNTSDADLVSAFSAPD-VTA 189 Novosphingobium...
WP_011399143 101 IIVGDYSNGNDGIVVKG-VHSVAELKGREINLVEFSVSHYMLARALDKNGMSE--RDVTVVNTSDADIASAFISSS-KGA 176 Hahella chejuensis
WP_011156973 109 VIVGDFSNGNDAVILKD-KKDFAAIKGQKVNLVEFSVSHYLLARALESNKLSE--KDVKVVNTSDADLAAAYKTAD-VTA 184 Rhodopseudomona...
WP_011682639  98 ILVGDYSNGNDALLVRN-GIQMKDLAGKKMLLVEKTVSEYLFDRAMTLGGLRDqiKRVRMINTSDSDIATAFIGDGsASA 176 Candidatus Soli...
WP_011268762 184 VTTWNPMLSDIKARPGVTEVFNSSQIPGEIMDMMVVNTQTLK----DNPALGKALTGAWFEVVALMNAKnaqaKAALEHM 259 Pseudomonas syr...
WP_011467604 184 VVTWNPLVSEILTTPGANKVYDSSNIPGEIIDTLVVNTETLK----ANPKLGKALVGAWYEIMAKMEAD----KAVREHM 255 Saccharophagus ...
WP_011138993 187 LVTWNPQLSEVKSMKGANLVFDSSQIPGEIIDLMVLNTQTLK----ENPNLGKALTGAWFEVLALMKKGd---LTALSAM 259 Wolinella succi...
WP_011589166 184 VATWNPLLSEITAMPDSHKVFDSSKIPGEIIDLMVVNTETLK----ANPNFGKALTGAWYEIMATMSADddagKAARTFM 259 Alcanivorax bor...
WP_011093480 184 VVAWNPQLSAIKSQPDTSEVFQSGQIPGELIDMMVVNTQTLQ----ENPALGKALAGAWFEMMSLMKAGd---KPALESM 256 Pectobacterium ...
WP_010919699 198 LVTWNPQLSEVKKAPGAKEVFNSAMIPGEILDGLMVSTEALK----ANPNLGKALTGIWYETLALTVAQtpegKAAREQM 273 Caulobacter vib...
WP_011444273 190 AVTWNPQLSVMKAQPGVTQVFSSADIPGEIVDLLVVDTATLK----ANPDLGKALAGIWYETVALMQRQdeqgKAARAAM 265 Novosphingobium...
WP_011399143 177 VVTWNPPLQQARNAKGAQMIFDSSMIPGEILDITFVKT---N----ADERFKKALTGAWYETMAIIS-GgpggKEAIEHM 248 Hahella chejuensis
WP_011156973 185 VVTWNPIVSEILASPDAHKVFDSSQIPGEIMDLMVANTAVVK----DNPNFAKALVGIWYETMAKMTAEgadaKAAKEAM 260 Rhodopseudomona...
WP_011682639 177 VVTWKPMVSQIAKQKGVNSLFNSSQIPGEILDLTVVRTDVLNrpdgAGQKFAKALAGAWFETLAQMSVSgaagDKVLAAI 256 Candidatus Soli...
WP_011268762 260 AKASGTDLAGFQAQLDTTKLFATPKEALEFATSKQLPDTQRKVADFSFAHGLLGEGARDADAVGMSFANGvTLGDKGNLK 339 Pseudomonas syr...
WP_011467604 256 GKASGTDLAGYEMQLASTKMFYSAADAVAFVKSEQLVKTMQYVAEFSFDHGLLGEGAPDAGFIGIETPAG-VFGDKANIK 334 Saccharophagus ...
WP_011138993 260 AKASGTDLAGYKKQLESTKMFYEASEAVKFITSAELPETMKKVSEFSFEHGILGEGASSAAFVGMEFPGGkSFGDPKNLK 339 Wolinella succi...
WP_011589166 260 AKASGTDLAGYDAQLASTRMFYKASEAVTFVNSPELKDTMQKVAEFSFDHGLLGEGAPDAGFVGIETPVG-VFGSESNVQ 338 Alcanivorax bor...
WP_011093480 257 AAASGTDLAGYQAQLKTTHLFYSAQDNLAFLTSADLPNTMKRVADFSFDKGLLGTGAQSADFIGMTFPGQiTQGDSANVK 336 Pectobacterium ...
WP_010919699 274 AKLSGSDLAGFEAQLKTTYLYADPKAALAATVSPDLITANDRVRKFSFSMGLFGQGAKSVDDIGISFPGGkVLGDPNNVK 353 Caulobacter vib...
WP_011444273 266 AKLSGSTPQAFDSQLKTTFLYGEPKAAVDAATAPALVTTMTKVRDFSFSKGLF-KGAASADAVGMAFPGGkTLGDPQHVT 344 Novosphingobium...
WP_011399143 249 AEATGATVPEFKAQLRTTAMFYTPAEARDYTKSDAIEKTMEYVRQFSFDKGLFGATAQSADFVGIQFDNGkVLGDEKNVK 328 Hahella chejuensis
WP_011156973 261 AKASGTDLAGFESQLASTKLFSKATDAEAFTKSAAIGSTMDRVRKFLFDKDLLGKGAKSADAVGIELADKsVLGDKANVK 340 Rhodopseudomona...
WP_011682639 257 AEGSQDTLASYKEQLSTTKMFYTPKEAAAFGASSDLKQKMALVRQFCFDHGLLGANTKSVDDVAIRYPDGsIQGKPDRVR 336 Candidatus Soli...
WP_011268762 340 LHFDPSYVQMAVDGKL 355 Pseudomonas syringae
WP_011467604 335 LRFDETYMLMAAEGKL 350 Saccharophagus degradans
WP_011138993 340 LRFIDTYVKMAAEGKL 355 Wolinella succinogenes
WP_011589166 339 LRFIADYMAMAADGKL 354 Alcanivorax borkumensis
WP_011093480 337 LRFDDTFVRLAAENKL 352 Pectobacterium atrosepticum
WP_010919699 354 LRFDPAYVQMAADGKL 369 Caulobacter vibrioides
WP_011444273 345 LRFDESFMKLAADGKL 360 Novosphingobium aromaticivorans
WP_011399143 329 LRFTSKYMEMAAQGSL 344 Hahella chejuensis
WP_011156973 341 LRFDPSFMNAAAASKL 356 Rhodopseudomonas palustris
WP_011682639 337 LVYDVAYMQMAAQGKL 352 Candidatus Solibacter usitatus
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