Conserved Protein Domain Family
GC_trans_RRR

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TIGR03382: GC_trans_RRR 
Myxococcales GC_trans_RRR domain
The domain described here is small (about 30 amino acids), hydrophobic, only moderately conserved, and similar to numerous other transmembrane helix-containing sequence regions from convergent evolution. This domain is found, once per protein but in many proteins per genome in several bacteria of the order Myxococcales. It begins with a signature Gly-Cys motif. Its other features, including a hydrophobic transmembrane helix, Arg-rich cluster, and location at the protein C-terminus, resemble the PEP-CTERM proposed protein targeting domain.
Statistics
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PSSM-Id: 213808
Aligned: 48 rows
Threshold Bit Score: 32.4506
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011552191 1520 GCSSSAdaGGPMSLTWSVLvLAGWQVARRR 1549 Myxococcus xanthus
WP_002617825  860 GCAA----SPGSLLGWAVL-ALLPRVRRRR 884  Stigmatella aurantiaca
WP_002617234  562 GCGCSH--APTSALAFFAAlALLLIGGRRS 589  Stigmatella aurantiaca
WP_002612592  424 SCAALP--GSAGGMALGAA-VLGLLLRRRR 450  Stigmatella aurantiaca
WP_015934811  296 GCGA----GGTGALAMIGA-AALAALRRRK 320  Anaeromyxobacter dehalogenans
WP_011556178  495 GCAAA---GASFAGPLAFA-ILGILGRRRR 520  Myxococcus xanthus
WP_011554902  491 GCGCQG--GPSALFPMALL-ALSLVVRRGR 517  Myxococcus xanthus
WP_011554438 1005 GCGCSG--GGSGAAVFGLA-ALARVLRRRK 1031 Myxococcus xanthus
WP_011552746  293 GCAAA---PGPVALGLAAL---VLTRVRRR 316  Myxococcus xanthus
WP_011552745  264 GCSAA---GPGGALSLVAV-WSLWLARRRR 289  Myxococcus xanthus
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