Conserved Protein Domain Family

VPLPA-CTERM protein sorting domain
A probable protein export sorting signal, PEP-CTERM, was described by Haft, et al. (). It is predicted to interact with a putative transpeptidase we designate exosortase. This model describes a variant with conserved motif VPLPA, rather than VPEP. It appears to be the recognition sequences for exosortase D (TIGR04152). This variant is found prominently in two members of the Rhodobacterales, namely Jannaschia sp. CCS1 and Roseobacter denitrificans OCh 114. One interesting member protein has a full-length duplication and therefore two copies of this putative sorting domain.
PSSM-Id: 132413
View PSSM: TIGR03370
Aligned: 24 rows
Threshold Bit Score: 29.0202
Threshold Setting Gi: 499775060
Created: 8-Oct-2014
Updated: 2-Oct-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
WP_011454638 220 IPLPASALLLLGGLAALPVMRRRRG 244 Jannaschia sp. CCS1
WP_011456462 259 VPLPAGLPLLLAGLGVFGVMGGRRK 283 Jannaschia sp. CCS1
WP_011456512 179 IPLPAALPLLLGGLGGLALLRRRRQ 203 Jannaschia sp. CCS1
WP_011455794 180 VPLPASLPLLGVGALALGVVARRRR 204 Jannaschia sp. CCS1
WP_011454257 169 VPLPASVGFMLLGLAGLGTVAARRR 193 Jannaschia sp. CCS1
WP_011455194 204 VPLPASLGFLALGLGGLAAVRRRAR 228 Jannaschia sp. CCS1
WP_011567673 162 VPLPAAAWMLIAGLGGLAAFGRRRK 186 Roseobacter denitrificans
WP_011454941 168 VPLPAAGWMLLAGLGALSLHRRRAC 192 Jannaschia sp. CCS1
WP_011416324 165 VPVPAAVWLLGTGLIGLVGIRRRMV 189 Syntrophus aciditrophicus
WP_011454252 198 VPLPAGIWLLLASLAGMTGLRRLSA 222 Jannaschia sp. CCS1
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