Conserved Protein Domain Family
VI_chp_1
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TIGR03347: VI_chp_1 
type VI secretion protein, VC_A0111 family
Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Links
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Statistics
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PSSM-Id: 274530
Aligned: 39 rows
Threshold Bit Score: 252.525
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_009888601  19 EPHRFEFFQAVRL-L-EtwfaK-RHP-----QR--HAASRPGEIVARRIGFRNTLSLGFPPSEIeraqsydaagdalkdd 88  Burkholderia th...
EMQ36184       4 NVREYNFYQLVEL-L-Q----K-LAD-----IN--PE--SEEWERDCRLVFSANPSLGFSPSDV---------------- 51  Vibrio cholerae...
WP_025571820   8 ksNEFSFYQAVLL-L-E----K-HYQfepnsNF--VAVGENKYFHQERIEFSVSPNLCFPKSDM---------------- 62  Vibrio parahaem...
EFU49081       8 DVRNCNFYVLMEA-LyR----R-HGA-----PG--QDISLRTEPAREIVRFSSDASISFPGTDL---------------- 58  Escherichia col...
WP_010954869  19 NAHQYNFFQLLER-L-H----G-LHG-----DD--LEPRWADEATRLRVRLASDPRLTFPVSDV---------------- 68  Pseudomonas putida
WP_011261633  27 TIEHIGHLSLMKA-L-Dh--vC-HHL-----KT--KHDDWDLDQAYDRIQFVANPSQGFAPREI---------------- 78  Aliivibrio fisc...
WP_011531909  18 sIREYSLFQAVLLvM-E----Q-LRE-----AY--P--YLEDEELYDLVEFQANPSLGFPGSDV---------------- 66  Pseudomonas ent...
WP_010941101  19 RGHEFSFAQAVRL-L-R----L-LAA-----AQ--GREG----ACPCGVRVRPELSLSFPVADV---------------- 64  Geobacter sulfu...
WP_004512538  19 RGHEFSFLQVLRI-L-E----L-LGE-----R----------DGTKRPVEVIPRLSLGFPAADV---------------- 60  Geobacter metal...
AHI66942      11 EAKHFAYFQAIRL-L-R----RiVRE-----RRehHAGAASAPAAPMPIHTRPNLALSFPDTDV---------------- 63  Burkholderia th...

WP_009888601  89 sqrnAAL----EA--GALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQlKRDHAARAFFDVFSNRATALFYSAWKKYR 162 Burkholderia th...
EMQ36184      52 ----MAL----EA--RDDERWVMLTNFFGLSGAQSPLPGFILEQLVTEE---PGGYKQPFLDFFNNRLINLVYRVWRKYR 118 Vibrio cholerae...
WP_025571820  63 ----EFIvh-mER--NGQQYSRVETNFLGLHGSSSPLPASYTEKLTGRE--PDDNPVKDFFDFFHNRYTSLLYRVWKKYR 133 Vibrio parahaem...
EFU49081      59 ----SAL----SR--SQNGQYVLQTRFLGFSGSQSPLPGYYLDQMAQESA-QNEDGLKEFLDLFSHRWTQFAYHAWRKYR 127 Escherichia col...
WP_010954869  69 ----YKA----ERmpGEDERYRVCTTFMGLHGTDSPLPTYYLEQVAYEHA-QGVGVRPAFFDFFNHYLLSLLHRIWRKYR 139 Pseudomonas putida
WP_011261633  79 ----QSIkvitHD--DGLPKVIMTLNMLSLIGASSPLPAFYNDYLLQDEN----NVLKSFLDIFHHRLHRLIRSVWQKYR 148 Aliivibrio fisc...
WP_011531909  67 ----DRIef-fHE--HGQLRARMRFNLIGLVGSSSPLPAFYGEQALGDNE-DGNPT-RTFLDLFHHRLQRLLLPIWRKYR 137 Pseudomonas ent...
WP_010941101  65 ----ARI----ER--QSDG-YRITARFLGLYGPSSPLPTFYTEELIDEER-EDGSASRDFLDVLSHRIFDLWVAGDAKYR 132 Geobacter sulfu...
WP_004512538  61 ----AGV----ER--VGDG-YRVIATFLGLYGQATPLPAFYTEELLDEEA-TDSSAGRDFLDIVNRHIYGIFANVARKYR 128 Geobacter metal...
AHI66942      64 ----ERI----DK--ADDGGYRVVANFFGLYGVSSPLPTFYTEDLIDEAF-KGRHAARGFLDVLHRALYPLLFDAWLKHR 132 Burkholderia th...

WP_009888601 163 LPLHYELDRDERYLPLLLALAGV-SNDDARstvqqGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYF-GV-P-IRIE 238 Burkholderia th...
EMQ36184     119 YYVRFQPGAQDVFSAQLFALVGL-GDPDLR-----GETPINWCKMLAYAGTLAGRSRSPQVVAGIIAHCF-DL-PdVSIR 190 Vibrio cholerae...
WP_025571820 134 YHVQYQSGATDAFSGRMLHLAGLsGVMQDC-----GVAELDRAKVLSYVNQLSTRTRSPKLISGIVSHYF-SL-PsVRIE 206 Vibrio parahaem...
EFU49081     128 YYICFRSGGTDTFSQRMYALVGL-GNQSVR-----DRLAINHSKMLAYAGILATPGRAPEVICNLVSHCF-DL-PdVTIE 199 Escherichia col...
WP_010954869 140 YYIRFQPGARDGFSQYMFALLGL-NDKQLR-----GDTTLPWSRLLSFAGVIASRGRAPGTVAGIIAHCF-DLtH-VQIR 211 Pseudomonas putida
WP_011261633 149 YNAAFREGANDPFSQYIFALLGL-KNPELR-----DDDSINWSRLFPYLGLLSQRVRSANTIEALLRYYFqHS-A-IHIE 220 Aliivibrio fisc...
WP_011531909 138 YRASFESGALDGFSSHLFALIGL-GGEEIR-----RAKELNWKRLLPYLGVLSLRAHSAALIEAVLRYYFkHA-D-LVIE 209 Pseudomonas ent...
WP_010941101 133 LFNRVVEDGSGDDLERLFCLAGL-DLAQGQ-----TVLPES-GRWLRYVGLLGQVPRSALGLRTMVADAL-GV-P-VEVI 202 Geobacter sulfu...
WP_004512538 129 LFLQVDEQRSDAVTERLHALGGY-GEETLR-----AQLPDPRS-LLRYTGLFAQHPRSALGLRTLLTDAL-DA-P-VEVI 198 Geobacter metal...
AHI66942     133 LSLRIVEERDAHALRPLYALAGV-DARIAR-----D-AGLPEHALLRHVGLLSQRPRSASGLRALLADAFaPA-A-VDIE 203 Burkholderia th...

WP_009888601 239 QFVGKWYDVPSDQLSVLGDVN------------VTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALER 306 Burkholderia th...
EMQ36184     191 QWVRRRVSIDRSQQLALGKQN------------ARLGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCK 258 Vibrio cholerae...
WP_025571820 207 EWVYRRVEIADSQRNKLNRAN------------CILGQSFHLGQSIADLNGKFNLCIDDIDFETFKQFSYEGELHKTLVG 274 Vibrio parahaem...
EFU49081     200 RWQLRKVAIDPAHQNRLGVRNpkgktaghipgrSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTM 279 Escherichia col...
WP_010954869 212 EFETRTVTTNSKQLVSLGRSN------------GELGSTFMVGSRTRTRSSKFTILISELDQAQLHDLLPSGINFGRLRA 279 Pseudomonas putida
WP_011261633 221 ECILRHCSIPTQQLCELGQNN------------AVLSSSSVLGSSAPDRANKFRIHIKELTWDHFHSFLTDKPNWIALNQ 288 Aliivibrio fisc...
WP_011531909 210 QCLERRVDILEEQCNRLGLAN------------SLLGEDAVLGERVRDRSGKFRIHITQLDWQRFHEFLPIGFGYQPLCA 277 Pseudomonas ent...
WP_010941101 203 PCQHRQVSIPPGQRLAVGIAA------------SSLGIDTVVGTNLDDRLGMFRLCLGPLSREQFADLLPGAPGRSTLDL 270 Geobacter sulfu...
WP_004512538 199 SAVPRIVTVPPEERSRLG-TI------------GTLGEDAFVGSEIPDRSGMFRIEVGPLRRDRFAELLPGTPERKRLDL 265 Geobacter metal...
AHI66942     204 PCVPQWLPIPDDQRTRVGARA------------HRLGVDARVGARMRDDGARLRIVLRDVPGPLFRALMPGGDAFRRLRF 271 Burkholderia th...

WP_009888601 307 MLTLLAGVTLEYEVSLVLRRAEVGASVLG-VG--A-RLGWDAFLC 347 Burkholderia thailandensis
EMQ36184     259 LVEFILREQMAYDLELAMDEREAPLFCLDtRQn-I-ALGWTSFLG 301 Vibrio cholerae O1 str. EM-1626
WP_025571820 275 LMRFILRDPMSWDLKLTVNLDSIPNNQLG-NGe-GnNLGQTFWLG 317 Vibrio parahaemolyticus
EFU49081     280 FLSFILRDQFAWDLRLCLAPQQAKGMRLS-DPasS-RLGRTSFIG 322 Escherichia coli MS 110-3
WP_010954869 280 LIDFLLRDGLAYDLELRLKQNALSPFYLH-RSqgA-YLGWTSFVd 322 Pseudomonas putida
WP_011261633 289 LVQFTVKDPLDFDIQLHLKKDEPRPLTLSvDNe-C-CLGWTSWLG 331 Aliivibrio fischeri
WP_011531909 278 LTRFTLRDPLDYDIRLELRREEIRELRIG-EQnvC-HLGWTSWLG 320 Pseudomonas entomophila
WP_010941101 271 IVELYLDAPLAWDVELTLAPGETPEARLG-ACrgA-RVGWDTWLG 313 Geobacter sulfurreducens
WP_004512538 266 LVALYITDPLAYEIELILAPGEAPPAMLG-SG--I-RLGWDVWMt 306 Geobacter metallireducens
AHI66942     272 LVRLYLTQPFTVDVAIRVRARDALPARCG-GGawS-RVGLDAWLG 314 Burkholderia thailandensis H0587
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