Conserved Protein Domain Family
alt_F1F0_F1_gam

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TIGR03323: alt_F1F0_F1_gam 
alternate F1F0 ATPase, F1 subunit gamma
A small number of taxonomically diverse prokaryotic species, including Methanosarcina barkeri, have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 gamma subunit of this apparent second ATP synthase.
Statistics
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PSSM-Id: 274519
Aligned: 6 rows
Threshold Bit Score: 457.318
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007340302   7 LRRKIETASDLQSVVTTMKTLAAVRIHQYQRAADALMDYNRTIELGLQVILREQRLQPLQTSewggqNRPSSGHengshH 86  Rhodopirellula ...
WP_011463474   8 LRRKIGSAADLQSVVRTMKAMAASSIGQYENAVRSLDDYYRTVQLGLAACFRRNEPADGTPA-----HQNVVGA-----I 77  Albidiferax fer...
WP_011575449  11 IQHKLHSANDLKSVVRTMKAMAAVNITQYENAVHALDDYYHTVQLGLMGYFHHIDLPAQTPSvkitpSSKERGK-----T 85  Pseudoalteromon...
WP_011308025   8 LRTKIDRAKDLQSVVRTMKALAASNIGQYEKSVSSLSDYYHTVELGLGLCFRKIALMTASQEg---kTQKNTRL-----I 79  Methanosarcina ...
WP_011357805   8 LSRKIERAGMLRSVVRTMKTLAASSIRQYEDAVRSLEDYYDTVELGLAVSLSREPKRAVGRPg---pLKRV--------- 75  Pelodictyon lut...
WP_011342785   7 MQRKIKSAADLHMVVRTMKALAAVSIRQYEDAVRALDSYYEAVELGLRAVLRDHPLAGRSAS---------SGD-----T 72  Pelobacter carb...
WP_007340302  87 GVIVFGSDQGMCGQFNEQIATHALEHHAkhcR---RPPEA-LWIVGARVAFLSTDSGWLIDEAFRIPTTVPEIADCVSDL 162 Rhodopirellula ...
WP_011463474  78 GAVVFGSDQGLVGQFNDVMVDFVVKTLG---N---LPGKKtVWTVGERIQSRLADSGLPLGERFILPNSIGAITPLVGQI 151 Albidiferax fer...
WP_011575449  86 GIIVIGSDQGLVGQFNDVLLAFMTEKIA---T---LTNDKlIWAVGERMYSYLEDSQHTVQKPLVLPNTIGTVTSLVTEL 159 Pseudoalteromon...
WP_011308025  80 GAVVFGSDQGLVGQFNEIITDYAVKELE---T---LPGKAqVWAVGERVYSRLADEGLTPIGLFNVPNSVKAITPLIAQI 153 Methanosarcina ...
WP_011357805  76 -AIVFGSDQGLVGQFNDVLSTKVAGEYQ---D---DAAEPtILAVGERVHARLSEDAAPPEELYLVPSSVGAITGLVSAL 148 Pelodictyon lut...
WP_011342785  73 VALILGSDQGMAGRFNEAMLEFAAGWLQ---RdaeIKGSPeCWVAGEKVAGGVEERFGKIGEFFALPTSVQGITATVQEV 149 Pelobacter carb...
WP_007340302 163 LTAVEAVREQRNLTKLRIYSNKRSSAGSYQPNTTQLLPIDFAWLKQLSVKQWESPC-LPTFGGEREELFSRLVRESLYVS 241 Rhodopirellula ...
WP_011463474 152 VIEMETRREKGEIAQVYLFHNRPESGSVYTPVSQRLLPLDAVWQRDLATINWPTKN-MPQVMNDKEATLLAFVREYIFVS 230 Albidiferax fer...
WP_011575449 160 LQEIHRHQQTNQLEEVYLFFNHSAQNAQYEPTCQRVLPLDKQWQQQINTQVWPTKC-IPELLTAPQKSFSALIGEYLFTS 238 Pseudoalteromon...
WP_011308025 154 LVENEKLRSQDEDAELHLYYNRHKTRVTYEPVSQRLLPFDETWRDDLTKLSWPTKNlLPEVMGNITETLRALIREYLFVS 233 Methanosarcina ...
WP_011357805 149 LARTEAILEEHHGIEVTLFFNSPESGERYRPTQSRILPLDETWKERLRDRRWPSRT-IPQLIGEPLDLQRSLLGEYLFVS 227 Pelodictyon lut...
WP_011342785 150 LIRFEKRRSQGQ-CRLLLFHNRPSAGTGYEQQCVLLLPPDEHWFRHMAGQKWPGRC-LPMIAAGWEQTFPALISEYLFVT 227 Pelobacter carb...
WP_007340302 242 LYQACAESLASENASRIAAMQAAEKNIEETLDELNTAFKTQRQTAITEELLDVVVGFEAL 301 Rhodopirellula baltica
WP_011463474 231 LFMACAESLASENASRLAAMQRAEKNIDELLEDLNRSFHRLRQSGIDEELFDVISGFEAL 290 Albidiferax ferrireducens
WP_011575449 239 LFRAATQSLASENASRLTSMQRAEKNIDELQTLLLRQFHRHRQGAIDEELSDLVSGFEAL 298 Pseudoalteromonas atlantica
WP_011308025 234 LFRACAESLASENSSRLAAMQRADKNIEELLNNLSGEYYRVRQSGIDEELFEVVSGFEAL 293 Methanosarcina barkeri
WP_011357805 228 LFRASAESLASENSSRLAAMQRAEKNIDDILDSLMHRYHRRRQSMIDEELFDVVSGFTAL 287 Pelodictyon luteolum
WP_011342785 228 LFRGFATSLAAENAARLAAMQRAEKNIDELQADLQSRYHTLRQTVITEELFDIISGFEAL 287 Pelobacter carbinolicus
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