3ZFS


Conserved Protein Domain Family
frhA
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TIGR03295: frhA 
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coenzyme F420 hydrogenase, subunit alpha
This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein is a member of the Nickel-dependent hydrogenase superfamily represented by Pfam model, pfam00374.
Links
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Statistics
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PSSM-Id: 274506
Aligned: 5 rows
Threshold Bit Score: 663.826
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3ZFS_A         1 MSERIVISPTSRQEGHAELVMEVDDEGIVTKGRYFSITPVRGLEKMVTGKAPETAPVMVQRICGVCPIPHTLASVEAIDD 80  Methanothermoba...
WP_010876915   4 LSERIVISPTSRQEGHAELVMEVDDEGIVTKGRYFSITPVRGLEKIVTGKAPETAPVIVQRICGVCPIPHTLASVEAIDD 83  Methanothermoba...
Q60338         6 VTNRIEIAPTTRHEGHAKLILEVDEEGIVNKAYYLNTTPVRGFETMLKGKPAEFAPIAVMRICGICQTTHGIASCEAIEN 85  Methanocaldococ...
WP_011170764   1 MGKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVSRFCGICPIAHATSSVEAIED 80  Methanococcus m...
WP_011449294  15 LSKVVEVSPTTRHEGHSKLVLKVNDAGIIERGDWLSITPVRGIEKLCVGKTMHQAPKISSRVCGICPIAHTLAGVGAMEA 94  Methanospirillu...

3ZFS_A        81 SLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDF-VPEN-----------LMADAINSVSEIRKNAQYVVDMVAGEG 148 Methanothermoba...
WP_010876915  84 SLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDF-VPEN-----------LMADAINSVSEIRKNAQYVVDMVAGEG 151 Methanothermoba...
Q60338        86 AIDCEVPDDGLLLRELVGIGNRLHSHPLHHLLTIDDF-LKPDet--------dlKIELIKLIQRMRKVGQLVVDIVGGEG 156 Methanocaldococ...
WP_011170764  81 ACGITPPKDGLLLRELTGLGNKMHSHPLHEFLIAPDF-IPEAd-----------RVEYIKRIQEMRKTGQFIVDTIGGEA 148 Methanococcus m...
WP_011449294  95 SIGCEIPQDAYLLRTILQCANRLHSHALHNILSLPDMyIPGTdtkinpftpeePVRTVAKRIQRLREIGQTVGEIVGGEA 174 Methanospirillu...

3ZFS_A       149 IHPSDVRIGGMADNITELARKRLYARLKQLKPKVNEHVELMIGLIED-------------KGLPEGLGVHNQPTLASHQI 215 Methanothermoba...
WP_010876915 152 IHPSDVRIGGMADNITELARKRLYARLKQLKPKVDEHVELMIGLIED-------------KGLPKGLGVHNQPTLASHQI 218 Methanothermoba...
Q60338       157 IHPPNIVIGGMRTNITERAKSRLYYALRQYEKDAYELYEKYTELIERyl---------eeIGIPD-LGAHEYPYIATHTT 226 Methanocaldococ...
WP_011170764 149 IHAPNIKVGGMLKNITENAASKIYYKCREYEKLAKEHVEYLIPIFESnml-------adgTEIPEKLGYHDFGYIATDAT 221 Methanococcus m...
WP_011449294 175 IHPGNPRVGGMYYNISPQAKQKIYDLAKEALPLAIAQMDFMIAVFKNwenrgtvtvgkteVEIPEKFGWHDQGYMAVDPV 254 Methanospirillu...

3ZFS_A       216 YG-----DRTKFDLDRFTEIMPESWYd--------DPEI--------------AKRACSTIPLYDGRNVEVGPRARMVEF 268 Methanothermoba...
WP_010876915 219 YG-----DRTKFDLDRFTEVMPESWYd--------DPEI--------------AKRACSTIPLYDGRNVEVGPRARMVEF 271 Methanothermoba...
Q60338       227 YG-----DRYAINWDDVTEIPAQRYYd--------DEEA--------------KQTTTIQIPLYAGVPAEGGPRARMVKF 279 Methanocaldococ...
WP_011170764 222 YG-----NRENIDQSKVVEYTPYDVY---------EKDV--------------AVQACTTIPRYNGRLMEVGPRARFAKF 273 Methanococcus m...
WP_011449294 255 FDsssldFEPKWDPDRWTDVSPYNWYqgelevsleDADYpvggttkvgtktwpQMQACTSVPLYDGQPVEVGPRARLVQF 334 Methanospirillu...

3ZFS_A       269 QGFKERG-VVAQHVARALEMKTALSRAIEILDELDTSAPVRADFDERGTG-KLGIGAIEAPRGLDVHMAKVE-NGKIQFY 345 Methanothermoba...
WP_010876915 272 QGFKERG-VVAQHVARALEMKTALARAIEILDELDTSAPVRADFDERGTG-KLGVGAIEGPRGLDVHMAQVE-NGKIQFY 348 Methanothermoba...
Q60338       280 GNFREGGsAMDINIARAQENLGAVYRALEILDELDLNGKTRAE-VEYKDG--FGIGVHEAPRATNTHMAEVGkDGKIKSY 356 Methanocaldococ...
WP_011170764 274 HDFKNKG-AMAIHIARAYENVVHVKRAMEIIDELDVNGKTRSNEPILGDGeKIGLGVHEAARGHNTHQAAIDaKGRITYY 352 Methanococcus m...
WP_011449294 335 KNYDRKG-AMGLQIARQMEYPDCLYTMIEACDALDCNGSVLADEIPQGDG-SLGWNANEAPRGCDVHLARVK-DGKVQEY 411 Methanospirillu...

3ZFS_A       346 SALVPTTWNIPTMGPATEGFHHEYGPHVIRAYDPCLSCATHVMVVDDEDKsVIKNEMVK 404 Methanothermobacter marburgensis str...
WP_010876915 349 SALVPTTWNIPTMGPATEGFHHEYGPHVIRAYDPCLSCATHVMVVDDEDRsVIRDEMVR 407 Methanothermobacter thermautotrophicus
Q60338       357 RIIAASTWNFPIVEKAIEGYPQQYAEVIMRAYDICASCATHVIVKDEETKeIIEVRKML 415 Methanocaldococcus jannaschii DSM 2661
WP_011170764 353 NAIVATTWNIPLIGKATEGTHYKFAEHVVRAYDPCVSCATHVIAMDYDNK-IVDKKIIQ 410 Methanococcus maripaludis
WP_011449294 412 TLLVPTTWNFPTCSRALEGAPWQLAEVIMRAYDPCVSCATHMLVVDESKK-IVAQKLVQ 469 Methanospirillum hungatei
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