Conserved Protein Domain Family
methan_mark_11

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TIGR03280: methan_mark_11 
methanogenesis imperfect marker protein 11
The first twenty-nine completed genomes with a member of this protein family include twenty-eight archaeal methanogens and one other related archaeon, Ferroglobus placidus DSM 10642. The exact function is unknown, but the protein likely belongs to a system usually tightly linked to methanogenesis.
Statistics
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PSSM-Id: 213789
Aligned: 7 rows
Threshold Bit Score: 421.081
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011018721  21 MYERIATLTDEDRERVLLIEDHPTPVGAEWVVRNYEATSPLVEKAWREGKRHFFLLRVGEASLDLEPSVRAAGVESVEVR 100 Methanopyrus ka...
WP_011171537   6 SYKKIIAMVDEELGLTELVEEHPCPSGSEWLMYQYQRTSPAIVSSWRNGNKHHFILKNGKTDLNLVPSISAAGIEEVYLK 85  Methanococcus m...
WP_010870435   4 NYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTKIGKEKLNLVPSLSAAGIEEVYIE 83  Methanocaldococ...
WP_011407051  20 PYHEILTVTDNNEDKIELIEYHPCPVGSDWMITQYQRTSPLILEAKRDGNKHTYLVKKGKTTLDLKPSFCAAGIEEAIIG 99  Methanosphaera ...
WP_010877003  20 PYRKVLTMVD--RDMVEILEYHPCVSGSEWMIYQYQRSSRLIERARRDGNRHSYLARTGKAPIELQASLNAAGIEEVAVE 97  Methanothermoba...
WP_011034698  48 PYRGIYAVCDAKNEYAEIIEHSNCYSGAAWSLYHYAK-SPLILKARSTGNMIRYFMKTGTSNLELKPSVAAAGIESVIVQ 126 Methanosarcina ...
WP_011448789  11 HYPWICAVSDDTGGQVELIECFDCIGGAMWVKKHYAK-SPLVTGVRTVGSMNRFLLRTGEVDLALEGSKFPAGISKVSVE 89  Methanospirillu...
WP_011018721 101 DGEVRVTHAGLAGAGVGAALSRGcAEGVSRVEIHEEGGGSRLGRATVVTPELRRLVIGVDDTDTEEEGATWSAVDVICRR 180 Methanopyrus ka...
WP_011171537  86 NGKVHIVYAGLAGAGVGIELRKN-AKNVTGAELIEKGGGSKLGRGMIQTPKMEKITVGIDDTDTKEEGATWVLANEVGKL 164 Methanococcus m...
WP_010870435  84 NNRVHIVYAGLAGGGVGAELRKG-AKNVLEVNILEKGGGSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIGLE 162 Methanocaldococ...
WP_011407051 100 DDEIKIIHAGLAGAGVGAAFCRGkAAGVKRVEIFEKGGGSKVGKAAVVTPKLRKVIIGIDDTDIPTEGATWTLANNIATE 179 Methanosphaera ...
WP_010877003  98 GDEVRVVHAGLAGAGVGAAMCRGmAEGVKRIELYEVGGGSKPGRAAVITPRLEKVVIGIDDTDTPESGATWTLANNIG-- 175 Methanothermoba...
WP_011034698 127 GDEVEITYAGLGGGGVGATRCRAfADGVLHYRISESGGE-RCAKGTVVVPRRDRILIGIDDTDSKDVGATWTLTHNIARQ 205 Methanosarcina ...
WP_011448789  90 GDEIAISYIGMGGGGVGATICRAsAEGVIRSSYDESGGG-KVAGSTIVLPRMSRVLIGVDDTDTPEEGATWTLVHNIART 168 Methanospirillu...
WP_011018721 181 LEDEAGVF-YSRHVTVQLYPKTPHRTRNCAAVVVELG-VPTKRVERVKREFLRMLKEVSFSDHTCAAFWDRLEFPRELRD 258 Methanopyrus ka...
WP_011171537 165 IEESKMGF-YIDHTITQLFPGNPNKTQNCVSIALTFA-IYPEYKYKIGKEIEKLLKEKTLSEKTAIAIYRGLTPSQSMKL 242 Methanococcus m...
WP_010870435 163 VEKEGLGY-YLDHTIVQLYPGNPNKTQNCVSIALSFA-VYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKL 240 Methanocaldococ...
WP_011407051 180 IQDEKGYK-YLEHITCQLYPNNPNKTKNCVSIILVFA-VKDEDKEDLINSIKSKLKKDTLSENTAFVVYDKLDIPQEVKN 257 Methanosphaera ...
WP_010877003 176 LEARKQGFeYIDHVTVQLYPHNPHKTQNCVSVALAFA-VRPGEADKLVALVRDLLRDNTLSDKTAMAVLRGIVVPEKLRE 254 Methanothermoba...
WP_011034698 206 LDCQESV--YLSHSLVQLFP-VPEKTQNCMSTVLEFGcVDDKAKSKLLSSFKKALEKYSASKETGLVVLSD-FYAKGLYS 281 Methanosarcina ...
WP_011448789 169 VADKRHR--YLSHTIVQLFP-VPFRTKNCVGVVAEFAsSNPE---ELARRFSELLMQYTLSKETGMAVFTG-FSPDRLLE 241 Methanospirillu...
WP_011018721 259 LGNAAKRRIVSREEVDEVVEICEIEVVSIgDGERGRIGAVAALPFIDDHGLAARV 313 Methanopyrus kandleri
WP_011171537 243 YTMKVKREMVPINEAKMVAMRNNIELIEV-TGDGGIIGAVAALGLAECHKTAAKL 296 Methanococcus maripaludis
WP_010870435 241 FALKAKKEMVKIEEAKSIALRNNIKIIPI-NGEGGIIGAVAALGLAEHHSLAPKL 294 Methanocaldococcus jannaschii
WP_011407051 258 YGIEAKKSMKSFEEAEKIAKRNNIHIEYV-TGKAGLIGALAAIGLYNSPEEYAKV 311 Methanosphaera stadtmanae
WP_010877003 255 YSAKSKRTLMEVEEAEGVARELGVELIEV-TGSQGKIGALAALGLYDDPEEAARV 308 Methanothermobacter thermautotrophicus
WP_011034698 282 YSNRCRTERVLKEDSLRCAEENNVEVL---LDGNGVIGALASLPWFGRPEESIIP 333 Methanosarcina mazei
WP_011448789 242 YGWRTKSGQVTPDDA-RALAGDDLKIW---INGRGITGAIAAIPFYTRYDEGLQL 292 Methanospirillum hungatei
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