Conserved Protein Domain Family
methan_mark_6
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TIGR03272: methan_mark_6 
putative methanogenesis marker protein 6
Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. [Energy metabolism, Methanogenesis]
Links
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Statistics
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PSSM-Id: 274498
Aligned: 7 rows
Threshold Bit Score: 176.45
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010869999   8 IVLAENALTTPGKLVRYINTLNQP-VIVKETCFGAYIEGEEELVDKLAQEIRNYERNRIFCKDRGYAIWDKRRCRAFRGG 86  Methanocaldococ...
WP_011406612   2 IVLGPGCRVSSKELMNFLHLLELP-INIRLTCYGANINGVREDIMEAIEKTRKLDPSHIFIKFRGFPPGDPRRCRAKRGG 80  Methanosphaera ...
WP_010877468   2 IILGPSARLSSSELVQKLHLLGLP-LTIKSTCYGALIHGDEDVVMEAVKRIRSLDPPNIFTKERGFPPGDPRRCRGHRGA 80  Methanothermoba...
WP_011032863  12 VIVISSDKVLPSDAAMKIYESEFP-VTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGDERRCRASRGG 90  Methanosarcina ...
WP_011449272  16 YVFIESYKATPDDIAARAYEVSGR-VMIKETCFGLQITGEEEEVERVIAHIRALDPAHIYVKDRGFPPGDPRRCRANLGG 94  Methanospirillu...
WP_011018702   9 FALAPGTGVSPKELVQWLLENSPPeVTIKETCFGAIADGPEDELRKLAERAREEFGYAVFSKVRGYPAGDPRVCRRTRGG 88  Methanopyrus ka...
WP_011499929  12 IVVISSESILPTDAVMKVYESEDS-ITIKETCFGTMVNGPREAVLKVVETLRSMDHNHIFVKERGFKPGAEVRCRAGRGG 90  Methanococcoide...

WP_010869999  87 GpREGFHQLEAEQAVLDKIGLALDKidkegiK---PMEEVlakeneliKRETKIPVEEFKNIIEKVL 150 Methanocaldococcus jannaschii
WP_011406612  81 A-REGFHQIEAEYKLLEDVSYALEH------P---KHVDL--------ELPKKISVDDFKSIVDEVE 129 Methanosphaera stadtmanae
WP_010877468  81 A-REGYHQLEKEFKLLGYVCEALEN------P---QEVAP--------EIKEKIPVDEFRRIAEKAQ 129 Methanothermobacter thermaut...
WP_011032863  91 GpRPGFHFLREEVEMLPAIGAALDDle---aKgcvKEKP---------EEKRRLKVSELEKVIEAEL 145 Methanosarcina mazei
WP_011449272  95 A-RPGYFGHEYEMGFIRRIAIGLEEle---sP---SERPVhgs---eqKETEGLSVKRLMELIEQEA 151 Methanospirillum hungatei
WP_011018702  89 GpRPGFPQLQREVELLDLIAEGLRAld---kG---EEVEL--------EEREPVSADTIRKLAEELN 141 Methanopyrus kandleri
WP_011499929  91 GpRPGFHFLREEVNMLPMIGRALDKyea-geP---LEMH---------EAPKKLDISKLKKIIDSEF 144 Methanococcoides burtonii
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