Conserved Protein Domain Family
dnd_assoc_1
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TIGR03236: dnd_assoc_1 
DNA phosphorothioation-dependent restriction protein DptG
A DNA sulfur modification (phosphorothioation) system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. This protein is one member of a three-gene restriction enzyme cassette that depends on DNA phosphorothioation. [DNA metabolism, Restriction/modification]
Links
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Statistics
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PSSM-Id: 274485
Aligned: 3 rows
Threshold Bit Score: 536.796
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_000105716 100 YLFGQNNSIKPIHPYLFNYMSAPESkEKENQKYAQFMRDILVyGGIDISSV------FNNKESEDILTELIlskLDVSSK 173 Bacillus cereus
WP_011400712  90 YFDDDAKGLFQVSPEFMLFKAGSAS-SGNTRHVGTVLGNMLL-SRPEVAPVssenmnFLEAELLDEFQSCV---SELSPP 164 Hahella chejuensis
WP_011329730  80 YF--ENEQLFKISPELLIFKALKDEvDTNSKKLGDMFVGLL--NGLTIDSSpvnelnFLEKEIKAEFDSFYvtgKSKVST 155 Pseudoalteromon...

WP_000105716 174 DISIQYQPlmeFLANLYQKDLKFLSESKDYFLKSFSLLTQFYSFMYVCQLVMKFEQFDVaDySNATPLYFALEWESISKR 253 Bacillus cereus
WP_011400712 165 DATEDYLP---FMGEVFAEDLSLLCSYPGYMMQNLKAFVGLYNFLYSAQLAMNLHSWRT-E-PTSKPLYFIMDTERASSE 239 Hahella chejuensis
WP_011329730 156 KAELAYLP---FLSELFKQDLQFLNKRPHYLLNNFNSVIRLYGFLYISQMALNIKNWANgE-PTSRPCFFIIDNEKASDE 231 Pseudoalteromon...

WP_000105716 254 RKAADSleGFRRVKEKAPNLFVHIHTMSQLSHnelqsCDEVESKNKIRFMTYTELKELMDSKGEDTSERLVNDINEwv-- 331 Bacillus cereus
WP_011400712 240 RTYVRE--ALNALLGYVGDLFPVLSALEYLNQ-----PDNKEATRFPLWKHFQYIEKLPDEEKYELHQGLKCFLES---- 308 Hahella chejuensis
WP_011329730 232 RSQVKNf-GYSQLHEYLEYLFPYL----FMNE-----AIQAKGEVKPLWQLFESIN---ENDVTKLNQFGRDFIEDrmqr 298 Pseudoalteromon...

WP_000105716 332 hrYSHI---ETWK-DSVTPKEESKDLPQAFRTLFNCLQEGMSTgSCEKFGKNIEDLGVNVFLKNRGSIGAVFNMSHEMLL 407 Bacillus cereus
WP_011400712 309 --YRTTrgrEPWGgELSTPEDVFKAIVSTATEIFSQARSSQLT-VNRKVVASFETEVARHFIQNRKRGGRVLIMNQDYLL 385 Hahella chejuensis
WP_011329730 299 kwYNTD---QNWL-DSSDKKEVLQQLLSLSHAQFDN-KKGRLTeYNDTVVKGTLGNILDPFIQRRGRAGQVLTFNQDYIV 373 Pseudoalteromon...

WP_000105716 408 LLTAVCVKE-ERMPLNRLFEEFSKRGVAFDRHSKKMIIELFDSHNILDKKSDSGDAQYVKRIL 469 Bacillus cereus
WP_011400712 386 LLTNLAVGNkEKLQYQQLIEEFKRRGVWFDQQSQQALIEFYERVGNLERMSDSGDAVYVRKTI 448 Hahella chejuensis
WP_011329730 374 LLTNLAIGErNKLRFHEIIKEFEARGVFFDKQSQQSLIDFYERMGNVERMSDSGDAVYVRKTV 436 Pseudoalteromonas haloplanktis
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