Conserved Protein Domain Family
DGQHR

?
TIGR03187: DGQHR 
DGQHR domain
This highly divergent, uncharacterized domain has several absolutely conserved residues, including a QR pair and FxxxN motif. Its most striking feature, however, is a near invariant pentapeptide motif DGQHR. Several different subfamilies occur specifically as a part of DNA phosphorothioation systems, previously called DND (DNA instability during electrophoresis), while others (e.g. CPS_2936) occur in other contexts suggestive of lateral gene transfer (sporadic distribution of helicase-containing cassettes). The region described by this model is about 280 amino acids in length; additional sequences show local sequence similarity.
Statistics
?
PSSM-Id: 274476
Aligned: 38 rows
Threshold Bit Score: 173.226
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_00109257   19 AWEINHP-GG-K-FYTFICDTETLLR---IAYV----S--MEERNKTGVQRPLSERRCKEVAKFINSIDAVIANNIILNL 86  Nostoc punctifo...
ZP_00616050   10 ALRILQR-EDvP-LYLFALAASDVAR---IADVarisR--DDFGKLIGYQRPEKKQHVNQIVDYLDTDGALFPNGLILAL 82  Kineococcus rad...
ZP_01090723   16 ALRIDQN-VDhP-LYMFTLTSSELLQ---VADIsrisR--DEDGKLLGYQRPDVRQHVQNIVDYLDSDSIIFPNSIILAL 88  Blastopirellula...
ZP_00729799    8 ALRIRQG-EErQ-LYSLAIEGKQISK---IAAIsr-iR--RGEESLVGYQRPEVRNHIREIQRYIESANPMIPNPVIIAF 79  Escherichia col...
WP_002650805  26 AIEVKQGkNR-K-LYSFAADGKSLHDfctISRVs---R--QGEEGLEGYQRPEVMAHINQIRAYLESENPLLPNAIVVAF 98  Blastopirellula...
WP_012085859  11 ALQIRQG-ER-F-IYCFAVDGKVLPS---FTAVs---RvhRSNAALHGYQRPEVLSHIKAIRRYLESSDAMLPNAIVLAF 81  Kineococcus rad...
WP_011542918  11 AVRAEQA-GG-TsVFAFFLYGADINR---VADIs---RirRDDQELKGFQRREIRDHVKEITAFLDSGPVLFPNAIILAI 82  Sphingopyxis al...
WP_011426167  15 ASLITQG-NH-R-FYSLTIPSDVLAR---TCFVv---D--RDEDPIAGFQRLLDKDRAQQIADYIDAGFGTIPTSVVLSG 83  Rhizobium etli
WP_011043728  10 VIKKVVN-NV-T-VFSGWVEGKKVRD---IAKIvh-iT--REGKYIHGYQRSELPKHIESIKDYVESPKSTILANLVIGF 80  Colwellia psych...
WP_011616070  33 ASLIQQG-DK-Q-FYSVTMPTDILAA---HCFVt---T--RHEDVQNGFQRVLDKKRAEDIARYIDSGEGTIPGSIILSA 101 Cupriavidus nec...
ZP_00109257   87 PEETEYIPPNTE-------S-------Lt-------GILKFPd------R-E----NSAWVVDGQHRLFGFNYTEKRLN- 133 Nostoc punctifo...
ZP_00616050   83 PTSVHFRSSRGPgas-dglA-------Ta-------GELEIPcpe-edgA-P----RPAWIVDGQQRSLALARTRNTSFp 141 Kineococcus rad...
ZP_01090723   89 SSSVKFKQSRGPatddgfaK-------A--------GTIEIHlpt--gdG-P----KPAWIVDGQQRALALSKCKRRDLa 146 Blastopirellula...
ZP_00729799   80 DKRVRFEPLTDNd------D-------M--------GHLVIPfse-dkdF-E----KPGFIVDGQQRTAALRDAEINSFm 132 Escherichia col...
WP_002650805  99 DDTVKFKPDPGK-------A-------GtdspfsrsGVLEIPidnsiieE-D----KPGWIVDGQQRSAALRDARISGFp 159 Blastopirellula...
WP_012085859  82 NESVRFQPSRRK-------Niv---dySt------mGELIIPidetideA-D----KAAWLVDGQQRSAAIRDANVDEFp 140 Kineococcus rad...
WP_011542918  83 SPEVEFASARGR-------SpgnmcevGd------aGTLSIP-------I-YpegrRAAWIVDGQQRSLALSAAKDRTIa 141 Sphingopyxis al...
WP_011426167  84 QSISEFTYDRRK---------------Rt------vRFRDIP--------------KSFLVLDGQHRIYGFHLAKSELR- 127 Rhizobium etli
WP_011043728  81 NKSVTFTPLEGQ-------Te--------------fGHLEVPyfpespsQ-E----LPGSIVDGQQRSGGVKNSCHESYp 134 Colwellia psych...
WP_011616070 102 QEDADLKVLQGK-------------------------TLEFS-------AvP----RAFLVLDGQHRVYGFRMATTaf-r 144 Cupriavidus nec...
ZP_00109257  134 LLCTGFINIGIESQAKIFITINNEQKGiNPSVIYDLlpli----kdadFKEK-----------RTHSLVKQL---N---- 191 Nostoc punctifo...
ZP_00616050  142 VPVAGFVTENLDMQREQFLRVNTVQPL-PTNLVTELlpevpttisprmSARR-----------LPSALVDML---N---- 202 Kineococcus rad...
ZP_01090723  147 IPVNAFIADEVDLQRDQFLRVNSSKPL-PRGLITELlpevssnlpanlSAKK-----------MPSAICDWL---N---- 207 Blastopirellula...
ZP_00729799  133 MPVSAFIANDAEEQREQFMLVNSTKPL-PKTLLYELaphthgrlpsdlQMRK-----------FPSLLTQRL---N---- 193 Escherichia col...
WP_002650805 160 VCVIGFLAEGLEEQRQQFILVNATKPL-PKGLIYELlpstggklpmalQRRR-----------HPALLSERM---N---- 220 Blastopirellula...
WP_012085859 141 VAAVGFITHGEEEQRSQFILVNNAKPL-PKGLIHELlpdtvghlpakyAKRQ-----------LPALLMSRL---Nnedl 205 Kineococcus rad...
WP_011542918 142 VPVVGFVSDALETQREQFILVNKARPL-PTRLINELlpevsvllprdlAARR-----------LPSALCEAL---N---- 202 Sphingopyxis al...
WP_011426167 128 VPVVVYNELSRVDESRLFIDINTKQKPvPNELLLDIrkla----eyrnDVET-----------RLGDIFDLF---A---- 185 Rhizobium etli
WP_011043728 135 lPVSIFISEDENDYIQQFLILNLGKPL-TSVQLNALa-----------LNDDiykppalaikaFPLSISEELgfgD---- 198 Colwellia psych...
WP_011616070 145 VPVVIYSGLTPVEEARLFIDINTKQRQvPNELLLDIkqla-----qreDQRD-----------TLLRQTFDL---F---- 201 Cupriavidus nec...
ZP_00109257  192 ---QDPESPwYNEIKMLGIG--------KGLVSQAAFARNIEILIDSNGGVl--------SPYNENLQYAILVNYFNAFK 252 Nostoc punctifo...
ZP_00616050  203 ---QDPESP-FRGLIRRASTdvd--kksGAVITDNSLVLAIGESLNSPLGVlfpyrnladGTTDTAGIRQLLITYWTAVR 276 Kineococcus rad...
ZP_01090723  208 ---REKSSPfFGIIKRASTPkeq---kpETVIVDNSIVKMVEESLSQPSGClfsyrniatGETDFDGITSLLVVYWSAVR 281 Blastopirellula...
ZP_00729799  194 ---F-GEGSlAGRIKTATNPdgviadnsMIKMIDASLREGALYRFRDPAT----------GLGDEEKMVKLLNNFWSAVE 259 Escherichia col...
WP_002650805 221 ---FDEDSPlHGMIRTPTNGtgvvadntILKMLENSLTDGVLYLY-----------------TDIEDQLKLLKHFWSAVA 280 Blastopirellula...
WP_012085859 206 fsyNDDDSPfQGRIATPTAPdgyikdnsVLKMIESSLNEGALYQYRNPSDH---------S-GDADAMLLHLKIFWSLVR 275 Kineococcus rad...
WP_011542918 203 ---TDPNSPfFGLIKRESDAkdr-----agIVTDNALIETMKASLKTPAGAlgqf-khngDGNDTVAMYDALLLYWSAVR 273 Sphingopyxis al...
WP_011426167 186 ---TEPSSPlLGSMSPSKRKkd-----hISRVTFNAAVNPILGLFG---------------EASPSEIYRVMAAYLTAVM 242 Rhizobium etli
WP_011043728 199 ---NKNGTPpLKGLIKSNGNpl----gkIAESSITEFVSNVERMILKSINVrvh---qdlTKESKQLFAQIINNFWIAVT 268 Colwellia psych...
WP_011616070 202 ---SSDSASvMFGLMSPSSRqh----nkISRVTFSLAMKPALAVFNAPTPL---------S------VFQITNAYLAAFK 259 Cupriavidus nec...
ZP_00109257  253 AVFSEEWGSSKY-----VLTKAVGLSAMCGIFPKVH 283 Nostoc punctiforme PCC 73102
ZP_00616050  277 RLFPDAWGKPPTe---sRLMHGLGIRAMGRLMDRIM 309 Kineococcus radiotolerans SRS30216
ZP_01090723  282 EVFPEAWGKPPSk---sRLMHGAGLRAMGRLMDRIM 314 Blastopirellula marina DSM 3645
ZP_00729799  260 TVFTDDWDKKPRy---sRLLHGVGILALGSLMDEID 292 Escherichia coli E22
WP_002650805 281 EVFPDAWGLLPRk---sRLMHGAGFISMGFLMDTIA 313 Blastopirellula marina
WP_012085859 276 ATFPEAWSMPPRk---sRLTHGVGIQAMGFVMDALt 308 Kineococcus radiotolerans
WP_011542918 274 DTFPEAWGKPPAd---sRLMHSAGIRAMGALMDTIM 306 Sphingopyxis alaskensis
WP_011426167 243 GHAAEKKLEMDA-------TQPIVFRAILSIFPEIA 271 Rhizobium etli
WP_011043728 269 IVFESEWKNTSKsmkdtYIIHGTSIFGFSFLCRHMI 304 Colwellia psychrerythraea
WP_011616070 260 DVLDKARVDAS-------LTAPTTFRAVFDIFPEVA 288 Cupriavidus necator
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap