Conserved Protein Domain Family
Nterm_to_SelD

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TIGR03169: Nterm_to_SelD 
pyridine nucleotide-disulfide oxidoreductase family protein
Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Statistics
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PSSM-Id: 274465
Aligned: 28 rows
Threshold Bit Score: 481.701
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01114202   10 DLVLIGGGHTHALVIRMLAMKPIEG-VRVTLISDTIQTPYSGMLPGFLAGHYSVDDTHIDLNQLCRLAGVRFVHDRVIGL 88  Reinekea blande...
ZP_01620605   10 DLVLIGGGHSHAIVLKKFGMKPIAG-VRLTLITDVSHTPYSGMLPGYVAGLYNFDECHIDLRPLTQFSQARMILDRAIGL 88  Lyngbya sp. PCC...
ZP_05031396   13 DLVLIGGGHSHAIALRMLGMNSLPG-VRLTLITNVSHTPYSGMLPGHVAGFYTFDECHIDLRRLAQFAGAQLYIDKAVGL 91  Coleofasciculus...
ZP_01731361   11 NLVLIGGGHSHAIVLKLWGMNHIPG-VHLTLISDRTHTPYSGMLPGQVAGFYDFEETHIDLRVLAHFAGANFYHDTVINL 89  Cyanothece sp. ...
ZP_05037553   15 SLVLVGGGHSHALVLRKMAMNQWPAhVQLTLITNLTDTPYSGMLPCHIAGLYDFDTAHIDLRSLTRFANCHLIMDQMIGL 94  Synechococcus s...
ZP_01739927   11 DIVLIGGGHSHVGVLRQFAMNPVPG-VRLTLICRDTDTPYSGMLPGYIAGHYSHDDIHIDLSRLAEFAGARFYRDEAIGL 89  Marinobacter sp...
ZP_01915226   11 DIVLVGGGHSHVGVLRMFGMKPWPG-VRLTLICTDIHTPYSGMLPGYIAGHYSYDDVHIDLGRLCAFAGARLFKDEVVGI 89  Limnobacter sp....
WP_012161980  10 ELVLIGGGHSHAIALRNFAMNPLPG-VRITLISEQSNTPYSGMLPGHVAGHYTYEECHIDLRRLATAAQAQLYVDRAIGL 88  Acaryochloris m...
WP_012308336   3 DVVFVGGGHSHAIALKMWGMQSRAK-ARLTLISDVTYTPYSGMLPGYVAGFYDYEETHIDLRRLAHFAQADFLKDKVIGL 81  Synechococcus s...
WP_011589006   9 DLVFVGAGHSHALALRMLAMKPIPG-VRLTLVSPDSLSAYSGMLPGLIAGHYTLDDTHVDVYRLCQASGCRFIQASVTQL 87  Alcanivorax bor...
ZP_01114202   89 DPQHHRVQLAQHADLSYDKLSINTGSTPNL-SLPGAREHAIGVKPVSQLKAKWQQLLDRYD------PNQPPHWTVVGGG 161 Reinekea blande...
ZP_01620605   89 DLEKNQVICENHPPISFDILSIDIGSTPATlSVPGATKHSIPVKPISKFIDYWNTVKNTVIq----nPNKKMRIAVVGGG 164 Lyngbya sp. PCC...
ZP_05031396   92 DLNSNKVICANRPPVAFDVLSIDIGSTPAKeSVSGVAKYAIPAKPVPQFLKRWNRIIETLAq----hPKQSLSLGIVGGG 167 Coleofasciculus...
ZP_01731361   90 DLENKQVICEKHSPITFDNLSIDIGSIPQKsNISGASDYAIPAKPVAQFLTAWKNVKKTIKt----hPKQPYSLTIIGGG 165 Cyanothece sp. ...
ZP_05037553   95 DSAGQKVICQSHPPIAYDTLSIDTGSTPTKsQVSGADKYAIPAKPVPNLLQAWKRYLEDLEralvqnPQTATTISIVGGG 174 Synechococcus s...
ZP_01739927   90 NAAAQQVICRDRPPVSYDLLSINIGSSPRTaDVKGAAEHAVPVKPINRFNRHWLELLDRIKq-----hQGPFTLAVVGAG 164 Marinobacter sp...
ZP_01915226   90 DRANQKVICKNRPPVAYDALSINIGSTPQVqLVPGALENAVPVKPIARFNQRWVSLLERVKt-----hAGKTTIAVVGGG 164 Limnobacter sp....
WP_012161980  89 DLDRNQVNCAGHPPVRFDILSIDIGSTPELpDVPGILDYSVPVKPWRFFLHQWQQVIDRVSq----hPNQPISIGVVGGG 164 Acaryochloris m...
WP_012308336  82 DLNEKLIHCQNRPPVRFDYLSLDIGSTPATeTIPGVKAYAIAAKPVPQFLAAWEKILKMATq----nPNQKQEIIIVGGG 157 Synechococcus s...
WP_011589006  88 DPQQRHLQLSDGSQLAYDWLSLDVGATPDLsPLGGSHPRVVPVKPVASFYARWQQLCQHAE-------RQSPSLAVIGAG 160 Alcanivorax bor...
ZP_01114202  162 AAGVEVVLAMAH-------RFAQQGQP--------I---QLSLLHAGTELL-RGYRPGVRRRAELALKRAGVERISGFNV 222 Reinekea blande...
ZP_01620605  165 AGGVELIFSIQG-------CLSQIYSStnss-nnkL---ELHLFQRGEKLL-PERSQWVGKKVEQILKNRGVNLHLEQTV 232 Lyngbya sp. PCC...
ZP_05031396  168 AGGVELAMTMQR-------RINHVETRhg----tsV---KIHLFHRGNQLL-PGHNSWARRYVQKLLRKRGIQVHLGETV 232 Coleofasciculus...
ZP_01731361  166 AGGVELAFNMRT-------CLLNILENan-----nL---TLNLIHQGNHLL-TGHSHWTSKKVQSLLLENGTNIYLNETV 229 Cyanothece sp. ...
ZP_05037553  175 VGGVEMAFAMQV-------RLQQLVSNysqdasqqV---AVHIFQRGKHLA-KGRNRLTQWMVERLCHNKAIQVHTQETV 243 Synechococcus s...
ZP_01739927  165 AGGVEMALAMQY-------RLQNELRNianq-aveL---HVHILDAADTIL-PTHNPKVRTLFERTLAERGVNVHLGAAV 232 Marinobacter sp...
ZP_01915226  165 AGGVELALAMQF-------RLRNELRTmgrn-pdeL---EFHLFTADADVL-PTHNAGVRARFEKVLTERGVMLHRDAEV 232 Limnobacter sp....
WP_012161980 165 AGGVELVLTIQHqlqqilqAAGQPLAN--------L---TMHLFHRGARVM-TGHNARIRNRFQQILIQQGIHLHLKKTV 232 Acaryochloris m...
WP_012308336 158 AGGTELAFNIHH-------ALSQRLAS--------PellELHLVHRGQQLMgTNQNSGVSRQALRLLRQRGIQVHLRETV 222 Synechococcus s...
WP_011589006 161 AGGTEMTLAMAQ-------HFQRHQQP--------A---QIQLITSGN-LL-PGFPASVREKMHKRLQAHNVTLHTDSRV 220 Alcanivorax bor...
ZP_01114202  223 ----AQVKAD-----ALISDRGQ-RLSTDQSLWCTPAAAPSWPGDAGLDTDRQGFIAVNRFLQSTSHPDIYACGDVAAMV 292 Reinekea blande...
ZP_01620605  233 naveAEVEEK-----IISCDSGL-KVKCDRLFWVTQASASPWLKQAGLLTDKQGFIQVDDTLRSLSHPHIFAAGDVATMV 306 Lyngbya sp. PCC...
ZP_05031396  233 ----SQILPD-----KICCESGL-VVDCDYSFWVTQASAPSWIAESGLHTTSKGFISVGDTLQSLSHPHIFAAGDIATMV 302 Coleofasciculus...
ZP_01731361  230 ----IKITPSsphhyRITCDSGL-EIRSDFVFLVTQASSPQWIEKTGITTDKKGFILVNNYLQSVSHPNIFAAGDIATMK 304 Cyanothece sp. ...
ZP_05037553  244 ----CEVTET-----AVRCESGL-KVECDRTFWVTNASAPVWLKESALSLTSDGFIAVNDTLQTLSHPNIFAAGDVATMV 313 Synechococcus s...
ZP_01739927  233 ----TEVTAR-----TLQIEGEKsPLMADEVLWVTRAGGPKWLAQTELALDDGLFIRVRDTLQVENSDRIFAVGDIANMI 303 Marinobacter sp...
ZP_01915226  233 ----IQLDGH-----TLQTKQGE-NLHADEIMWVTQAGGAAWLKNTDLELDSRGFINVGPTLQTTRDPKIFAAGDIANLT 302 Limnobacter sp....
WP_012161980 233 ----LQVQKG-----KVFCESGF-QVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAAMV 302 Acaryochloris m...
WP_012308336 223 ----VEVTTT-----GLRCQSDL-TLM-GKVIWVTQAAAPPWLKESGLQTDDQGFVLVDQTLRSPSHPFVFAAGDIATMR 291 Synechococcus s...
WP_011589006 221 -----HCDAH-----QQLHMGDQ-PLTAQWVLWCTGVRGLPILENSGLECDERGFVRVTETLQTATDKRIFAAGDCAAF- 288 Alcanivorax bor...
ZP_01114202  293 QSPRPKAGVYAVRSAPFLAENLRRSFTAEPPKPVRLQTDFLSLLSLGDRTAAGQRG--P-LSFSG-AWVWRWKDRIDRAF 368 Reinekea blande...
ZP_01620605  307 NHPRPKAGVFAVRQGQPLFENLQRALLEKPLKPFTPQKQFLILIGTGNEKAIASRG--I-IGLGPyAFLWWWKDRIDRQF 383 Lyngbya sp. PCC...
ZP_05031396  303 NHLRPKAGVFAVRQGKPLVENLRRFVQGKALHPYKPQRRYLSLIGTGDGSAIASWG--S-LGWHS-RLLWRWKDHIDRKF 378 Coleofasciculus...
ZP_01731361  305 NYSRPKAGVFAVRQGQPLFNNLQSIILGTKLHSYYPQKFYLSLIGTGNKKAIASWG--S-LGLEA-SWLWTWKDYIDRKF 380 Cyanothece sp. ...
ZP_05037553  314 NHKRPKAGVFAVRQGPPLYENLKRQVTNRPLAPFKPQSRYLNIIDTDTDRSIASWG--P-FAVHA-KWCRSWKDSIDQKF 389 Synechococcus s...
ZP_01739927  304 HHPREKAGVFAVRQGKPLADNLRRMALGKTPLNYHPQKKWLALISTGDRYAVASRG--K-LSVSG-ALVWRWKDQIDRRF 379 Marinobacter sp...
ZP_01915226  303 STPLEKAGVFAVRMGKPLTKNLHLFVQGADLLEYRPQKTWLALISTGDKYAVASKG--S-LGFAG-AWVWQWKDWIDRRF 378 Limnobacter sp....
WP_012161980 303 ASPRPKAGVFAVRQGKPLAENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGalP-LGNES-AWLWRWKDAIDRKF 380 Acaryochloris m...
WP_012308336 292 DEPRPKAGVFAVRQGKPLLRNIQRAILGETLEAYHPQKRYLALIGTGDKQAFATWG--K-LSWRS-PLLWHWKDRIDRKF 367 Synechococcus s...
WP_011589006 289 PTPLPKAGVYAVRQARTLATNLRAVIQGQPLVAYRPQSRFLSLLSTGGKDAIASRG--GrLSVAG-HWVWRWKDHIDRAF 365 Alcanivorax bor...
ZP_01114202  369 MRRF 372 Reinekea blandensis MED297
ZP_01620605  384 MDQF 387 Lyngbya sp. PCC 8106
ZP_05031396  379 MWQF 382 Coleofasciculus chthonoplastes PCC 7420
ZP_01731361  381 MDRF 384 Cyanothece sp. CCY0110
ZP_05037553  390 MRLF 393 Synechococcus sp. PCC 7335
ZP_01739927  380 MKNF 383 Marinobacter sp. ELB17
ZP_01915226  379 MAKF 382 Limnobacter sp. MED105
WP_012161980 381 MDQF 384 Acaryochloris marina
WP_012308336 368 MAQF 371 Synechococcus sp. PCC 7002
WP_011589006 366 MAKF 369 Alcanivorax borkumensis
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