Conserved Protein Domain Family
cas3_cyano

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TIGR03158: cas3_cyano 
CRISPR-associated helicase Cas3, subtype CYANO
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. It contains helicase motifs and appears to represent the Cas3 protein of the Cyano subtype of CRISPR/Cas system.
Statistics
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PSSM-Id: 274457
Aligned: 4 rows
Threshold Bit Score: 425.08
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011323347  34 HQWALHDALTTGVSGAFVNDAPTGAGKTLSWLAPTISEGLDT---VAVYPTNALIEDQRKNIELMLDDIDGGDDVHLLAV 110 Natronomonas ph...
WP_011320846  34 HQAATLQALRNPNIDVVFNTAMTGDGKSLAAYLEVLQGEFSA---IGLYPTNELARDQEIQIQGYIEVFKPENQPRVVRL 110 Anabaena variab...
WP_010995733   7 HQVDVFE--QSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSa--IYIAPTNALIEQQTEAAKEFV------RDANLRHV 76  Nostoc sp. PCC ...
WP_011448842  25 HQVTTRAVMKERDEFFLFITAPTGAGKTESWFVPALTGE-DTgvfFALYPTNALALDQYRTISSLRDTLAPSRQVEFLDA 103 Methanospirillu...
WP_011323347 111 SS-DtlqD--EYAtDYPAESNGEILSYLlrd------afqRSETVILLTNPDIFVLLRRRIY--HNRTDGI--------N 171 Natronomonas ph...
WP_011320846 111 SG-A---DleVYA-ENEGLKKGQAIGTL------------TSQREALLTNPDIFHYLHRGAY--IIRSDSPdklwgkidK 171 Anabaena variab...
WP_010995733  77 VKsAsakDikSWPnDKVGSRSGEKLYNVlrnpatvfpdigANTPIILVTNPDIFYYATFFAYnnLDRGNIAag----fyT 152 Nostoc sp. PCC ...
WP_011448842 104 ERlTtlrD--EYP---VRVSKGEVITHIlqk-------msTQGGGIIVTNPDIFVLALKNVF--IDPYVESav-----rT 164 Methanospirillu...
WP_011323347 172 FFEVAVVDEFHRATRKEQNTLLfllDEMQDADTEICRlSYLVFLSATPDEELAGRFEEA--VSAPYYPLTGFGWRETPHP 249 Natronomonas ph...
WP_011320846 172 DFDLFIFDEFHVFAAPQIASVI---NTMLLIRCTNRR-KKFLFLSATPDSNLIDRLKLAgfRCQEINPIAQEKYQFPDNP 247 Anabaena variab...
WP_010995733 153 KFSTVIFDEFHLYDAKQLVGMLfylAYSQVFRFFENG-RKVVLLTATPEPACELALQNLkqAGVKIARIDGE-------- 223 Nostoc sp. PCC ...
WP_011448842 165 CVSSVIFDEFHLYDLKQTDFll--fLFDDLISSKHCSiRKFIFLSATPSKGLIEKIRDV--IGGDIIIADEF-------- 232 Methanospirillu...
WP_011323347 250 AMAADDQPAiafapgqlptAYRPVLPPLELRLQP-ATTFQTA----SRLAEQREETIDQLSQGRTVLMLDGLHEVDEIYR 324 Natronomonas ph...
WP_011320846 248 ELEQQLKTQ----------GWRQVARTISLDFIPlEPSFKASevwlKENSNLILEQFQQYPGSKGAIILNSIAAVKRLTP 317 Anabaena variab...
WP_010995733 224 ---AGNT------------SFLPSQTAVNLELRP-KPDIKEEw--lAELAAEVIQRFRERPDENGAVILDSLDNINRLSD 285 Nostoc sp. PCC ...
WP_011448842 233 ---CDEKEV----------DQRLILPPVEMSFIP-AKKFSSGeifiSRFFE--FEPF--LSGVRTAIIFDSAIEVAVVSE 294 Methanospirillu...
WP_011323347 325 LLQD--SELG-TIERIDGFHRADIADKLNRFDTLVSNAAVEVGVDFDTD---------QVLFSAHSAATFFQRLGRLR 390 Natronomonas phar...
WP_011320846 318 FFQEilQPHGlQVGENTGLSGKAEKERSLSADLVLGTSTIDVGVDFKIN---------FLIFESSDAGNFIQRLGRLG 386 Anabaena variabilis
WP_010995733 286 LLRQ--QGLGdDIGRITGPAPKKDRERAMQCQIILATSTVDVGFNFERHpkpkrqnldWLIFSARDRAAFWQRIGRVG 361 Nostoc sp. PCC 7120
WP_011448842 295 FLR---ANTSyRVCEQSGFRKDSMDE---PFDILVGNKAVEVGIDFKGDys-----iqHLIFSAFSVSEFLQRFGRLR 361 Methanospirillum ...
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