Conserved Protein Domain Family
cyt_nit_nrfE

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TIGR03145: cyt_nit_nrfE 
cytochrome c nitrate reductase biogenesis protein NrfE
Members of this protein family closely resemble the CcmF protein of the CcmABCDEFGH system, or system I, for c-type cytochrome biogenesis (GenProp0678). Members are found, as a rule, next to closely related paralogs of CcmG and CcmH and always located near other genes associated with the cytochrome c nitrite reductase enzyme complex. As a rule, members are found in species that also encode bona fide members of the CcmF, CcmG, and CcmH families.
Statistics
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PSSM-Id: 274448
Aligned: 7 rows
Threshold Bit Score: 843.628
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011218003   1 MIPEVGHYALILGCVFAVLGGTIPLYGLIKKDPYLIRYAWPLSYGAFFAISSSIVLLGYSFAVDDFSVVYIAQHSNSQLP 80  Photobacterium ...
WP_014668286   1 MIPELGFLALLIASLCAFLLALVPQVGIFLRKPYMIGTAWNLSYLFGIFTCIALFCLAYAFALDDFSVQYVAHHSNSQLP 80  Pasteurella mul...
WP_011070828   4 MIPEIGHILLIMSTVFALLSAASHLIGSYQRNLYLIAFGNRLFYALFFTLLTALCSLVFSFIADDFSVAYVANHSNSQLA 83  Shewanella onei...
WP_010944598   1 MLPELGYFSLIVAAVSASLQVLLSVFGELFKRSHYLSFNAFFSRLQALFCTFAFGVLGYAFIIDDFSIIYVAHHSNTQLP 80  Haemophilus duc...
WP_011200977   1 MIPELGFIALLIALLSSFLLTLIPLVGMIKRNTNLLSYAWNFSYLFAIFSTISIACLAYSFSVNDFSVEYVAAHSNSQLP 80  Mannheimia succ...
WP_005693283   1 MLPELGFFLLLLATASAFFLALVPQFGLFKKNPTLINAAWPLSYIFTLATTLSIGLLAYSFAVDDFTLEYVAAHSNSQLP 80  Haemophilus inf...
WP_011706299   1 MLAELGYLSLLLATGLALLQGLLPWLGLRLASRPLLGCATPLALLVAILLLAALLLLASCFGLDDFTLVYVAQHANSALP 80  Aeromonas hydro...
WP_011218003  81 QVFKIAAVWGGHEGSFLFWLFSLAGWSAAVAF-----------VYQYKapsgvnqpekqvqHEAFIGRVLVVLSLLIAAF 149 Photobacterium ...
WP_014668286  81 IFFKVSATWGGHEGSMLFWLFALALWLMLFAF-----------SSRHK-------------DPIICARALSVLGLICFGF 136 Pasteurella mul...
WP_011070828  84 LGYKVAAVWGSHEGSMLFWVFAIALWGAVINWrqathsakldlENLQA-------------DKAYFGRVLAILALVILGF 150 Shewanella onei...
WP_010944598  81 DFFKFAASWGGHEGSMLFWLTILTIWTAVFSF-----------FANKS-------------DRLFYDRTLAILGLISLGF 136 Haemophilus duc...
WP_011200977  81 LFFKIAATWGGHEGSMLFWLFSLSLWTAAFAF-----------FSRKI-------------DPVFSARTLSILGFICLSF 136 Mannheimia succ...
WP_005693283  81 TFFKVAATWGGHEGSMLFWLFSLSLWLAAFAF-----------FNRKN-------------DRTFSAQSLSLLGLICFGF 136 Haemophilus inf...
WP_011706299  81 LGFKLAAVWGGHEGSMLLFVFALGLWGALVAL-----------CSRRV-------------DPLITTRVLAIMGLIVGLF 136 Aeromonas hydro...
WP_011218003 150 SLFTLFTSNPFLRLLP-IPMEGRDLNPMLQDVGLIFHPPMLYLGYVGFAVSFAFAIAALTTSaSSELPWAGWSRPWALSA 228 Photobacterium ...
WP_014668286 137 CLFILFLSNPFERSFP-QAFEGRDLNPMLQDVGLIFHPPLLYLGYVGFAVNFAITISALVSG-HLDAAVARMMRPWVLLS 214 Pasteurella mul...
WP_011070828 151 NLFLLFTSNPFARLLPnIPVEGRDLNPILQDIGLILHPPMLFLGYVGLTVCFAAALASLIGG-KLPARHLDYLRPWVLLA 229 Shewanella onei...
WP_010944598 137 LLFILSVSNPFERNFP-PPPEGRDLNPMLQDIGLILHPPLLYIGYVGFAVSFAMVVASLMSG-VLDAAVSRWIRPWVMIS 214 Haemophilus duc...
WP_011200977 137 AIFILFFSNPFIRQFP-LPPEGRDLNPMLQDIGLIIHPPLLYLGYVGFAVNFAMTLSVMLSG-HVDAAIARWTRIWVLLS 214 Mannheimia succ...
WP_005693283 137 AVFILFYSNPFGRIFP-APAEGRDLNPMLQDVGLIFHPPLLYVGYVGFAVNFAMSLSALIYN-QSARQIARSMRGWVLVS 214 Haemophilus inf...
WP_011706299 137 GLYTLIFSSPFDRQFP-GPLEGRDLNPMLQDIGLIIHPPLLYLGYVGFAVNFAFAMAALHSG-RLDGAVAHWSRPWALGS 214 Aeromonas hydro...
WP_011218003 229 WVFLTGGISLGSWWAYYELGWGGWWFWDPVENASLMPWLTGTALLHSLIMTEKRNALTSWTILLSIFTFSLSLLGTFIVR 308 Photobacterium ...
WP_014668286 215 WLFLTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLLGLALLHSLSITEQRGIFSYWTLLFSLLAFSFSLLGTFIVR 294 Pasteurella mul...
WP_011070828 230 WIFLTGGNAFGSWWAYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFTLTTLFLCLLAFSLSLLGSFLVR 309 Shewanella onei...
WP_010944598 215 WGLLTAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALLHSLIVTEQRGIFSYWTILLAIFAFALSLLGTFIVR 294 Haemophilus duc...
WP_011200977 215 WFFLTLGIMLGAWWAYYELGWGGWWFWDPVENASLMPWLIGLALLHSLIVTEQRGIFSYWTILFSLFAFAFSLLGTFIVR 294 Mannheimia succ...
WP_005693283 215 WLFLTIGIVLGAWWAYYELGWGGWWFWDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVR 294 Haemophilus inf...
WP_011706299 215 WVFLTAGIMLGSWWAYYELGWGGWWFWDPVENASLLPWLLGTALLHALVVCEKRGAYGHAVLLLSIFTFSLSLLGTFVVR 294 Aeromonas hydro...
WP_011218003 309 SGVLTSVHAFAVDPTRGVALLSILGVVLLSSLTLFALRGGQY-IKPVRFGFLSREAALLAGNSLFAVATLTILLGTFYPM 387 Photobacterium ...
WP_014668286 295 SGVLTSVHAFAVDGDRGIALLILFFLLTVSAFTLFALKVNLP-QSAVRFRLISKENALLLLNILLTIATVSVFLGTFYPI 373 Pasteurella mul...
WP_011070828 310 SGIVQSVHAFAADPTRGMSILSLLVIFVGAALLIFALKANLL-RREIDFGLYSKETLLLLGIVILVVAAFSVLLGTFYPL 388 Shewanella onei...
WP_010944598 295 SGILTSVHAFAVDSDRGIALLILFFSLSFIALALFALKVRVW-PGRVHFQLFSKEVAFLLINGLLTVATSTVALGTFYPM 373 Haemophilus duc...
WP_011200977 295 SGVLTSVHAFAVDGERGTALLLIFFLLTALALTVFALKVNLR-QSAVRFSVFSKESFLLLANVVLTIATVSVFLGTFYPM 373 Mannheimia succ...
WP_005693283 295 SGALTSVHAFALDNTRGYVLLLIFFVLTALAFGLFALRAGSSsESAVKFQFISKSGGILLLNILLTIATVSTFLGTFYPM 374 Haemophilus inf...
WP_011706299 295 SGVLTSVHAFAVDPSRGLTLLLLLGLLLTCALTLFALRADIR-APYARFGFWSKEGLLGAAILLLSVACASVLLGTFYPM 373 Aeromonas hydro...
WP_011218003 388 IFQAFGLGNISVGAPYFNSLFVPLSFVIFAVMGLAPLIKWKNATSDNFIMR--IIAPLSASVVIGVALSVMFERGI--NL 463 Photobacterium ...
WP_014668286 374 VFTALQWGSISVGAPYFNTIFLPLFVMAMLAMILVLSLRWKTLNKKPFIQRtlLLFPALILAYGLIRYYVDHNQGLpfNF 453 Pasteurella mul...
WP_011070828 389 IYELLNLGTLSVGAPYFNAIFVPLTFLVVLLMGIAPLVEWQNTSKA---QAmpILLFGFGVLAIAFWVSLQAASGS--NL 463 Shewanella onei...
WP_010944598 374 IFTAMGWGSISVGAPYFNSIFAPLALLLMSVMGLAVVLCWKQVATSVILIRlwLLPIAFSLACSLIYFTIQTNNVHqfSL 453 Haemophilus duc...
WP_011200977 374 VFSAMGWGSISVGAPYFNSIFVPLLLIMLIAMVFVLATKWQKMNRTLLRQKsiLLIPALLIAYLIIHFTVRQDESLrfHF 453 Mannheimia succ...
WP_005693283 375 LFQAMNWGSISVGSPYFNSIFFPIITAILILMVIVLSIRKGQFDRTLLIRCgwLLIPSLILAGLMIWQQLRNNSALhfHA 454 Haemophilus inf...
WP_011706299 374 VFQSLHLGSLSVGAPYFNTIFVPLAICLMAMMTQLPRLRWQHLAAQ---HRikVLLPCLFGLLGGTLLSLAYPEPLrgGW 450 Aeromonas hydro...
WP_011218003 464 VVCVAFIMALWVTLT--------------------SLQVfyivqksrkHWKFdsQCCRQFAMVTAHIGVAVALVGATLVS 523 Photobacterium ...
WP_014668286 454 SAYGLLSLSIWLILA--------------------TLWL---------PWTQ--LKLKQLAMVIAHLGVAITAIGAIMSS 502 Pasteurella mul...
WP_011070828 464 FLLLGTAAALWLIVCllltllvslsvrkrastnqiTANA---------PVKSrtSKQRFIGMMLAHLGVAITIIGASAVS 534 Shewanella onei...
WP_010944598 454 LPIVFVGLAIWIIIS--------------------HF-----------PYRRymWKIQPLAMRLAHIGFAICVIGAIMNS 502 Haemophilus duc...
WP_011200977 454 SAFVLLSLAIWLLLA--------------------TLWI---------NWRK--IGLRRSGMILAHCGVAFAVIGAVMSG 502 Mannheimia succ...
WP_005693283 455 FAFVLLTLAIWLLFV--------------------TLWQ---------NWRQ--IRLSQFGMILAHCGVAIVTIGAVMSG 503 Haemophilus inf...
WP_011706299 451 LGLAANVLSLWLMAS--------------------LLLPll------qPTSLreLTLNRLGSLLAHLGVAVCALGIAQVS 504 Aeromonas hydro...
WP_011218003 524 YYVEETNNRMGPGSQLVLGDYQFDYQETELLIGPNYTAEQANIAVTringvdKNAERIGVIKPQRRHYTVRTMNMSEPGI 603 Photobacterium ...
WP_014668286 503 YYSSEIGVRLAPQQRQKLGDYEFHYQGFQHVLGPNYTSEKAHFVVT------KQNQAYAEIYPERRYYDVRTMNMSEVGI 576 Pasteurella mul...
WP_011070828 535 NFEEEALLRMGPGQGKPLAGYILVYESTENVETNSFTAIQANISIRdg---aNDEEILGYVRPQRQTFKSNAMEMSHAGI 611 Shewanella onei...
WP_010944598 503 YYGDEISVRLKPQQQASLAGFNFNYQAYRDVIGPNYTAERAIFTIE------KSHKQLATVKPERRYYDVRTMTMAEVGL 576 Haemophilus duc...
WP_011200977 503 YFGSEIGVRLAPQQSQMLNGYEFRYIGFTNELGPNFTSEKAHFEIY------KNNQKLTALYPERRYYEVRTMNMSEVGI 576 Mannheimia succ...
WP_005693283 504 YFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFTAEVAFFDVT------KNGKPYAEIIPERRYYDVRTMTMSEVGL 577 Haemophilus inf...
WP_011706299 505 HHSQEGGAVLAADKPYRLGAFEFRYEGSEPIIGPNYTAERITLSVH------QNGKEVARLTPERRHYSVRTMNMNEPGI 578 Aeromonas hydro...
WP_011218003 604 HWFWKGDIYITLGDKINKTDYAVRIQYKPYVRWLWI 639 Photobacterium profundum
WP_014668286 577 DWGWLGDVYIVMGDKLGQGEFTFRLQYKPFIRWLWF 612 Pasteurella multocida
WP_011070828 612 DHGFWRDIYVSMGVQLSDSEYLIRISYKPLATWIWL 647 Shewanella oneidensis
WP_010944598 577 YHAGLDDVYIVMGDKLGDFEYAFRLHYKPYVSALWL 612 Haemophilus ducreyi
WP_011200977 577 QWGVLGDIYIVMGDKLAPNEFSFRLHYKPFVRWLWL 612 Mannheimia succiniciproducens
WP_005693283 578 DGGFWGDLYIVMGDSLGKGEFTFRLHYKPLIRWLWA 613 Haemophilus influenzae
WP_011706299 579 AWGLFGDLYVVLGDKMGPGAYAMRLHYKPLVRWIWL 614 Aeromonas hydrophila
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