Conserved Protein Domain Family
cas7_csf2

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TIGR03115: cas7_csf2 
CRISPR type IV/AFERR-associated protein Csf2
Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf2 (CRISPR/cas Subtype as in A. ferrooxidans protein 2), as it lies second closest to the repeats.
Statistics
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PSSM-Id: 274435
Aligned: 3 rows
Threshold Bit Score: 474.832
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011254653   7 IQGIFKLTAPMHVADSIQYSLD---DKGYVVRKTNGMANVIATMRQNILTDG--MRVKIPYFPANDLRGRLRRKAAALVM 81  Aromatoleum aro...
WP_012606750   5 FSAFIRTRSPLHIAAPGSMRFDpatGKTVYGGQSVGVPCTGIQREVLFNEAG--EAKHFPVIAANNISGRLRRHAARIIL 82  Acidithiobacill...
WP_011458702  13 IRGVITLTAHTHQTSP--------------DGKTEGLTSQAKTSVISHAPGGnfLIPNIPYISMNSVRGLIRRAAGGVLM 78  Albidiferax fer...
WP_011254653  82 EALAAKGDKVPVELYAGLCAGA---SGAKPENSVTIEEIKRASKHVYMGLFGGGTRMLRsRFI-VSDAVPIMNATvkAGL 157 Aromatoleum aro...
WP_012606750  83 EAIRLRGQKVSLAVYNVLQCGAv--TGNPDGKDMTLGEYRQYRDDPYFGLFGGGPKMMR-RCLeVENALPVHADT--TAN 157 Acidithiobacill...
WP_011458702  79 QELSRSKHLISRNLYLSIMRGSfsrTGINAGGA-SYQQLIAAQDNLFAGLWGGGSFMYEsKVRgERDLFPMLECT--KDL 155 Albidiferax fer...
WP_011254653 158 VPALFGPYENRALPlsngseavesgdGYKLTEVRHIVRVDDVTRVMRSDELRAYVQDAENAVAQWQANVLqNRSDRKnQG 237 Aromatoleum aro...
WP_012606750 158 LGSMAHPHAHRHAQ------------GDHFTDVWGFRRNDDLRDLVNIHQAAEVVENFEAEFNARQQAIL-GEVDRE-KG 223 Acidithiobacill...
WP_011458702 156 FPQRYQASCLNATP-------------NQIIEKTLIASKDDFERLPQWDVIENVEQAYEEHMASKFGA---NQAKRDqKA 219 Albidiferax fer...
WP_011254653 238 EQKTTgeetas---ikksdLANVVSVQSIIAGTELYVRFDLQDTTTQAQRGLLLCALRDLINEQALGGWIRNGFGKFT-- 312 Aromatoleum aro...
WP_012606750 224 SSKTS--------------VKTYSALEFVRPGTLFDFSILMKWAISDAQAGLFLLTLDSLAETERLGGYGRNGFGRFSfd 289 Acidithiobacill...
WP_011458702 220 TAKADgvflkdseklktndLNTFTQVEAIIPGVQLYFGMTVRDA-TDAQIGLLLAAVASWANRNALGGGAVRGRGSFT-- 296 Albidiferax fer...
WP_011254653 313 AEHFTANLEDKAFAPFALDDKTGELKLTDAAGPMLEAMKCELAALTVPSLM 363 Aromatoleum aromaticum
WP_012606750 290 DAILLTSDGKEHQDAFHDGRLNREDPLVAHTLSAWHAASQKIDATALANLI 340 Acidithiobacillus ferrooxidans
WP_011458702 297 ASLQLFQGGDVQVDQVLVGEAPGYTSSTGVE-PYIaamraeleaaaepaal 346 Albidiferax ferrireducens
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