Conserved Protein Domain Family
cas8u_csf1

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TIGR03114: cas8u_csf1 
CRISPR type AFERR-associated protein Csf1
Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf1 (CRISPR/cas Subtype as in A. ferrooxidans protein 1), as it lies closest to the repeats.
Statistics
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PSSM-Id: 274434
Aligned: 3 rows
Threshold Bit Score: 333.011
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012606749  31 CGKNIWPGDR---YTKFSVGPSFMDVADLAARGSGMTCGHCTPLMS--SAMLRATANGIFSEGGVQPFAKWVDVARGLLN 105 Acidithiobacill...
WP_011458700   2 CAAQLQVGDLaklVTKDTFDKGFNNKLDIHHRGGDFVCGDCAALWS--KDYLQSYSKSYATTKGVFKLSSNEDVQAFLLS 79  Albidiferax fer...
WP_011254654  32 CGGHYAVGDP---CEAWKPTASFTDFADLQNPWGTHVCGACLAVNArgKDFMQDYTKSIVCKGGVFGFFSNDAVAHWLVN 108 Aromatoleum aro...
WP_012606749 106 PPEPPFVMLYATRKSQHMAWRARVNLSRDLFYVRVGLRDLKIRRPVLLSAVQACQTLGSFMGIKPTAKsl---------- 175 Acidithiobacill...
WP_011458700  80 PPSPPFVAIFNTRQQQHMIWRTPVCLSQDVMIVRVDDELIHIRRQLALDGARAWRSIESCMKVIGIKG------------ 147 Albidiferax fer...
WP_011254654 109 PPEPPYLAFISTQKLGHIAWKAPVNLSRERMVVRYNDKTLVIRRAHLLESIEAAKALSEAKIADEIAKaaekkgkkigrp 188 Aromatoleum aro...
WP_012606749 176 --ahPFAVLSSDLKDPAHSLLRRKGPEKTLDEAAeAYPEAYQLIQSLTLGETWAMRFLLS 233 Acidithiobacillus ferrooxidans
WP_011458700 148 ----LPARLERTLCDEGMGVIRPDVIKAALAHSP-ASAKAIGVLQTMRVGEWWALCALRH 202 Albidiferax ferrireducens
WP_011254654 189 tafrAPVRLEREMENPESGALAP-WVDEIAAGDP-ALMRAAHTLRSATVGEIWGLTHILY 246 Aromatoleum aromaticum
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