Conserved Protein Domain Family
halo_cynanin

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TIGR03102: halo_cynanin 
halocyanin domain
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin.
Statistics
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PSSM-Id: 274429
Aligned: 10 rows
Threshold Bit Score: 165.335
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P39442         48 ADQFLtdNDALMYDGdITDETGQDEVVVVTG--AGNNGFAFDPAAIRVDVGTTVTWEWTGDGGAHNVVSEPESDFEfESD 125 Natronomonas p...
CAI50463       49 AENFLneHDANQYDG-LVDRTGEDEITIDNG--AGPNGFAFDPAGVRIDAGTTVTWEWTGEGGAHNVVSEPDSDFDlETE 125 Natronomonas p...
CAI48560       40 IHEYV--HTTQGYEEsIPDRTGQSELRVAVG--AGTGGLAFDPVVARIDAGTTVVWEWTGRGSTHNVVSDDGSDFSfESA 115 Natronomonas p...
CAI48116       42 YDGWF--EDVPNYDG-TVDMTGEDEVVVDVG--GGAAGLTFEPAAIHVDPGTTVVYEWTGEGGGHNVVEQETGDRY-ESE 115 Natronomonas p...
vng:rrnAC0510 184 VDEWL--AAASNFDGtIVDRTDTDTATVTAGveGNGGKFAFGPPALKISTETTVRWEWTGEGGPHNIVSKGDGPLN--SE 259 Haloarcula mar...
WP_011223468  168 YGGWF--DDVSNYDGtTVDRTDADSVEISVGaqGNNGAFAFDPPAVRVTPGTEVTWTWTGEGGGHNVVSDGDGPLE-SGD 244 Haloarcula mar...
WP_011223468   32 YGGWF--DDVSNYDG-TVDKRGQDTVTITVGaqGNNGAFAFDPPAVMVSPGTEVVWEWNGEGGGHNVVSDGDGPLD-SGS 107 Haloarcula mar...
WP_004961731   42 YGGFL--DSVGNFDGsTVDATGQDTVTVEVGvqANGGAYGFGPPAVHVDNGATVQFEWTGNGGGHNVVSDGDGPLD-SGS 118 Haloarcula
WP_004962431   76 VADYV--GESSNFDGsMVVMTDQDEVSVSVGaeGNGGAFAFDPPAINVSTGTTVVWEWTGQGAGHNVKSEGDGPLD-SGS 152 Haloarcula
WP_011225026   61 VDEFL--SETDNYDs-IVDKTGSDSVTVDVGieANGAYFGFSPAAIRVDSGTVVTWEWTGQGSTHNVVAQHGTDFA--SE 135 Haloarcula mar...
P39442        126 RVDEEGFTFEQTFDDEGVALYVCTPHRAQGMYGAVIVE 163 Natronomonas pharaonis
CAI50463      126 LVDEEGFTYEVTFDEPGAALYVCTAHRAQNQYGAVVVE 163 Natronomonas pharaonis DSM 2160
CAI48560      116 RHAEAGTTFEQPFDEPGIALYVCTPHRAQSMFGALDVV 153 Natronomonas pharaonis DSM 2160
CAI48116      116 RTDEAGTIYEVTYESDGISKYVCVPHIANGMKGAVAVG 153 Natronomonas pharaonis DSM 2160
vng:rrnAC0510 260 LVAEEGNTYEHTFAETGTYLYSCKPHKGLGMRGAVVVE 297 Haloarcula marismortui ATCC 43049
WP_011223468  245 PVSESGTTYSHTFEEMGVYKYVCTPHESLGMKGAVVVg 282 Haloarcula marismortui
WP_011223468  108 PVSEAGTTYSHTFESEGMFKYVCVPHETLGMKGAVVVR 145 Haloarcula marismortui
WP_004961731  119 TASSAGVNYEHTFEEDGIYPYLCVPHEGLNMKGAIVVG 156 Haloarcula
WP_004962431  153 AVAEEGTTYEYTFEETGTYLYNCVPHKALGMVGAVVVE 190 Haloarcula
WP_011225026  136 QKSQEGATYTQTFDEAKTVLYVCVPHEGVGMKGAIVVE 173 Haloarcula marismortui
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