Conserved Protein Domain Family
ligase_PEP_1

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TIGR03098: ligase_PEP_1 
acyl-CoA ligase (AMP-forming), exosortase A-associated
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Statistics
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PSSM-Id: 211788
Aligned: 6 rows
Threshold Bit Score: 755.851
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011111718   4 LFHELIYQSAARYPDSTALIDQKR-------HLSYAALSEAVQSIASALHTLGLGRGERSAVYLEKRLETVIALFGASAA 76  Nitrosomonas eu...
WP_011330811  10 LVHSLVLDNALKGPDASALVHGDQ-------TLTYASLGETVEACARGLLALGLASSERVAIYLPKRPETVVTLFGAAAA 82  Nitrosococcus o...
WP_011238243  26 LLHRLIFASAERSPDAGALTFTGR-------THNYSGLSEDVIAFAAGLSGLGLARSERVGIYLDKRLETVTAFFGSSLA 98  Aromatoleum aro...
WP_004512930   7 LLGHLLEDTAARLPDKVAVKHHDR-------TITYAQLHEEALKMKGLIRGLGIKRGERVGIYLDKSIEQLTAMFGATLA 79  Geobacter metal...
WP_011390882   6 GLSDLLARACDHTPAATALSQAGAisrsappCLTYEGLFNRVCRLASGFKALGLRPGERVAVIAEKRFDAVAAMFAVAHA 85  Rhodospirillum ...
WP_011445981   8 TVHPLDHLALRGERGAPALVLRNH-------TLTHEALNARVGLLANWLQSRVPERGARVATWLPKSELSCLMPLAAVRA 80  Novosphingobium...
WP_011111718  77 GGAFVPVNPLLKAEQVAYILKDCNVRILITSAERLDLLSPVLPQCHDLHTVIITGDLHKASL--P-GLNVVSWRQTQTLS 153 Nitrosomonas eu...
WP_011330811  83 GGVFVPINPLLKPRQVAHILRDCNVRVLVTASNRIDFLQDALAECHDLRSLVIVDAPTQTIEklA-QPMAISWERLLSLG 161 Nitrosococcus o...
WP_011238243  99 GGVFVPVNPILKAEQVGYILQDCNVRVLVTSPERFAALKDTLATCHDLRHVVLTGTSAELPVl-P-GASMHRWQDMLSAP 176 Aromatoleum aro...
WP_004512930  80 GAVFVFINPILKKEQIEYIVNDCQIQLMITTSELFRKNHLAAPG-----KLIHVDEPEHDREghP------CWPKLKATL 148 Geobacter metal...
WP_011390882  86 GGVFVPINPVLKSPQIVHILADSAAKILVAPALRLALLDHTPP--PSLTTLLRFGDPAPASPdpPpGGESLDLDALAGAG 163 Rhodospirillum ...
WP_011445981  81 SLVHVPVNPLLKRGQVAHILADSGAALLVSNKARLDSLEPGDASCPLI-------------------EEPAAWAEAEALG 141 Novosphingobium...
WP_011111718 154 DAA--RLPDCIDSDMAAILYTSGSTGKPKGVVLSHRNLVTGAISVSRYLNNRPDDRILAVLPLSFDYGLNQLNTAFYTGA 231 Nitrosomonas eu...
WP_011330811 162 TTQqsPGHRRIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVAQYLENNSNDRLLAVLPLSFDAGFSQLTTAFSVGA 241 Nitrosococcus o...
WP_011238243 177 TA---PGHRVIDSDMAAILYTSGSTGRPKGVVLSHRNMVAGAKSVAGYLKNHSGDTLLAALPLSFDAGFSQLTTAFHVGA 253 Aromatoleum aro...
WP_004512930 149 PADy-TPVPGFSPDIACLIYTSGSTGMPKGVVVPHSTVVDGAEIVSTYLEITEKDRIISVLPFNFDYGLNQATTAVLHGA 227 Geobacter metal...
WP_011390882 164 DPI--AAHPVVDDDPACFFYTSGSTGLPKAVVVTHRNLIAGAQSVASRLDNRPDDRLLAALPLGFDAGFSQLTTAFAVGA 241 Rhodospirillum ...
WP_011445981 142 GQL--PPSDAAPDSLAAILYTSGSTGRPKGVMLSQANLWLGAVSVAHYLRLSPADRVLAVLPLAFDYGQNQLLSTWYAGG 219 Novosphingobium...
WP_011111718 232 TAILMNYLLPRDILTTVKQEQVTGLAAVPPLWAQLAQLDWK-----DAQSLRYITNSGGAMPRATLAHLRSALPDTQIFL 306 Nitrosomonas eu...
WP_011330811 242 SVVLMEYLLPKDVIKSITRHGITGITAVPPLWVQLASLAWPp---eAADTLRYIANTGGRMPKAATTALRRSLPQTKVFL 318 Nitrosococcus o...
WP_011238243 254 RVVLLNYLMPRDVLRALEKERITGLTVVPPLWIQLSQLQWPe---tVGEHLRYFANTGGRMPMETLSRLRSMLPRAEPYL 330 Aromatoleum aro...
WP_004512930 228 TLVLHQFVMVKDLLDLLVKEEITGFAGMPPIWAKLFNDKIKltynsDFPHLRYLTNSGGKVPRIMVSRIREFFSNSRLFL 307 Geobacter metal...
WP_011390882 242 EAVLHDYLLPQDVITACAHHRITGLTGVPPLWAQLARLDWPp---aATASLRFLASTGGAMPAAVLARLRALAPLARIHL 318 Rhodospirillum ...
WP_011445981 220 SVVPLDYLTPRDVVKAVERHGITTIAAVPPLWLQLAELDWPe----AARSLRRLTNSGGALTPSLVRALRTRFPEADLYP 295 Novosphingobium...
WP_011111718 307 MYGLTEAFRSTYLPPGEVDKRPDSMGKAIPNAEVMVLREDGSHCAPGEPGELVHRGPLVSLGYWNDADKTAACFRPL--- 383 Nitrosomonas eu...
WP_011330811 319 MYGLTEAFRSTYLPPEEVDKRPDSIGKAIPNVEIQVAREDGSLCLPGESGELVHRGVLVAMGYWNDPKKTAERFRPT--- 395 Nitrosococcus o...
WP_011238243 331 MYGLTEAFRATYLPPEEVDRRPDSIGKAIPNSDVFVLREDGNECAPNEPGELVQRGALVAMGYWNDPEKTAERFRPLpah 410 Aromatoleum aro...
WP_004512930 308 MYGLTEAFRSTFLPPEELDRRPDSIGKGIPNVEILVVNAKGEECAPGEEGELVHRGALITHGYWNDPEKTKVIFRKN--- 384 Geobacter metal...
WP_011390882 319 MYGLTEAFRSTTLDPERVGRKPGSVGRAVANAEVLVLHPDGGRCAPNEIGEIVHRGAFVAKGYWNDPEGTARRFRPI--- 395 Rhodospirillum ...
WP_011445981 296 MYGLTEAFRSTYLDPALVDSHPTSIGRAIPFAEVSVVNDLGDEAEVEEEGELVHAGPLVAQGYWQDAERTAERFRPA--- 372 Novosphingobium...
WP_011111718 384 -TPRQSGLTIPELAVWSGDTVRMDDEGYLYFIGRRDDMIKTSGYRVSPTEVEEVIYATEKVAEAAAFGVPHPTLGQAIVV 462 Nitrosomonas eu...
WP_011330811 396 -PGQPPELPLTEIAVWSGDTVRMDEDGFFYFIGRQDEMIKTSGYRVSPTEVEEVLYQAGLVAEAAVVGVLHPKLGQGIVA 474 Nitrosococcus o...
WP_011238243 411 aPGRQGGLVLPEIAVFSGDNVRRDEEGFLYFIGRRDEMIKTSGYRVSPTEVEEIVYATTLVGECAAFGVADDTLGQTIVL 490 Aromatoleum aro...
WP_004512930 385 -PRFHDQPHLHETVVYSGDIVKKDEDGFLYYVSRRDEMIKTSGYRVSPTEVEEVLIGLPGVSNVVVFG-KEVESGDQIIV 462 Geobacter metal...
WP_011390882 396 -PPHPGEPSRPGLAVWSGDLGWQDDEGDLTIVGRSEGLIKTSGYRVSPTEIEAPAHASGLIEDAVAFGLPDPLLGERLAL 474 Rhodospirillum ...
WP_011445981 373 -PPF---SKLGGMAVWSGDRVRRDAEGLLHFVGRRDAMIKTSGNRVSPQEVEEAAVATGLVAEAVALGLPDPHLGHAIHL 448 Novosphingobium...
WP_011111718 463 VAV-PRtGFALDRDVLQSACKQHLPAFMQPALIELRQtS-LPRNPNGKIDRKMLAGE 517 Nitrosomonas europaea
WP_011330811 475 IVK-PN-KDNFDPEDLLATCRAELPNFMVPLAVIVSE-N-LPRNTNGKIDRRALAME 527 Nitrosococcus oceani
WP_011238243 491 IVT-PPvGGTLDPAALLAECRARMPGYMVPACIEVRE-ApLPRNLNGKIDRKALAST 545 Aromatoleum aromaticum
WP_004512930 463 AVM-ETdHEEEHKKELLKECRKRLPTYMVPQEIHFEK-A-FRKTANGKIDRSGIKKE 516 Geobacter metallireducens
WP_011390882 475 VVTaPPgGAPVDLDALRRHLRAQLPAYLVPALLTQVD-S-LPRTASGKadraaarar 529 Rhodospirillum rubrum
WP_011445981 449 VAR-ASgDVEAARAGLLPALTRALPNFMVPRQVHWRQ-V-MPVSPNGKLDRVALAAE 502 Novosphingobium aromaticivorans
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