Conserved Protein Domain Family
PS_II_psb29

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TIGR03060: PS_II_psb29 
photosystem II biogenesis protein Psp29
Psp29, originally designated sll1414 in Synechocystis 6803, is found universally in Cyanobacteria and in Arabidopsis. It was isolated and partially sequenced from purified photosystem II (PS II) in Synechocystis. While its function is unknown, mutant studies show an impairment in photosystem II biogenesis and/or stability, rather than in PS II core function. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 213765
Aligned: 12 rows
Threshold Bit Score: 268.448
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011141400   1 MTSKRTVSDSKRAFFAAYPRPVNSIYRRVIDELLVEVHLLITNQDFRHDPLFATGLLTAYQALMEGYTPVEQRDAILRAL 80  Gloeobacter vio...
WP_011242326  27 VTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTAL 106 Synechococcus e...
WP_011130053   1 MSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTSGYRPEAHVKTLFDAL 80  Prochlorococcus...
WP_010994822   1 MELLRTVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEGYQPERDKESIFSAI 80  Nostoc sp. PCC ...
WP_011359855   1 MGERQTIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSSFKTTPLFAVGLCTVFDTFSAGYRPEEHITGLLDAL 80  Synechococcus s...
WP_011056976   1 MQNPRTVSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEGYQPEGDRDRIFHAL 80  Thermosynechoco...
WP_011125071   1 MGEQTTISDSKGLFHKEFPYVIPPVYRKVLDEYLVELNLLSNQSNFKIDTIFSYGLIISFERFTVGYEPDSHISKILESL 80  Prochlorococcus...
WP_010872648   1 MTKIRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQGYQPAEQLPAIFNAL 80  Synechocystis s...
WP_011128166   1 MAERHTIADSKRAFHQAFPHVIAPLYRRIADELLVELHLLSHQATFQANSLFAVGLKTVFERFTQGYRPMEHPAALLSAL 80  Synechococcus s...
WP_011364410   1 MAASQTIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSRFEANELFSVGLCTVFDTFIKGYRPEAQTDALFRAL 80  Synechococcus s...
WP_011132375  16 LKEKLTVSDSKKLFHEQFPYVIPGLYKRIVDEMLVELNLLNHQNEFIQDDLFCVGLTETFKELTKGYKPEEHLRVLFESL 95  Prochlorococcus...
WP_011293825   1 MSVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFSKFTSGYKPSEHATKLFDAI 80  Prochlorococcus...
WP_011141400  81 CTALELSYEQLHTDAAQWRAIAAELPAQEVLEVMAGKREAGDGrlkamGD-----TLAGIANAERFKYSRLFSLGLANIL 155 Gloeobacter vio...
WP_011242326 107 TQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNA-----PElv-rsSFQAIAGRSEFKYSRLFAIGLFSLL 180 Synechococcus e...
WP_011130053  81 CRSCGFDPNALRKQAQQTLESVRGHDLEEVQGWIQQQGKGAPE-----ALa---kALRNTAGSTTFHYSRLMAVGLLSLL 152 Prochlorococcus...
WP_010994822  81 CQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQD-----ADlq--aQLQAIANNSNFKYSRLFAIGLFTLL 153 Nostoc sp. PCC ...
WP_011359855  81 CSSNGYDANTFRKESKRCIDAAKTESVDAMDSHLAGQKLGEGS-----H------------------YSRLMAIGVLRLF 137 Synechococcus s...
WP_011056976  81 CVAEEMNPQQLKEDAASW-QQYQGRPLSQILDELNSGQPSAPL-----N-----------SLNHTGKYSRLHAVGLYAFL 143 Thermosynechoco...
WP_011125071  81 CNSCNIDIKAIKEYSNNIKKLINEKGIKEIINILTAEIKKSVG-----GI-----ALSNQSGKDKY-YSRLHAIGIYELI 149 Prochlorococcus...
WP_010872648  81 CHGVDQNPDQVRQDAKNVAASAHHIGLDA---WVTAAASEQAS-----GDnlllnTLTGIHQRHKFKYSRLFAIGLYTLL 152 Synechocystis s...
WP_011128166  81 CSSNGFDDEQLKQAAQHCLQDAEGHSDDAFQSWLKEQSLSDGA-----H------------------YSRLMAVGLLALL 137 Synechococcus s...
WP_011364410  81 CSSNGFDAAKLRKTYASLVEQAKGKDPESLKDWLSSHALKEGS-----H------------------YSRLMAVGLMSLL 137 Synechococcus s...
WP_011132375  96 CNSSNFEPKKIKEASKKTLEVYKDKSLKEISILLKQKSDSNL------------------------YSSRILNLGIYLII 151 Prochlorococcus...
WP_011293825  81 CNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNNDNKG-----YD----------------YYSRINAIGIYKLV 139 Prochlorococcus...
WP_011141400 156 E-QAGRAAAM-SEKDRLERLQQICTYLKLDYNRVKRDLDFFHSVLERIKRSKEVVDELSQTERRKR 219 Gloeobacter violaceus
WP_011242326 181 E-TAAPDLVQ-DPEALKTTVTAIAERFHLPSDKLQKDLDLYRSNLEKMEQARITMEEAIQADRRKR 244 Synechococcus elongatus
WP_011130053 153 A-SAQGDESS-DPEKLSQIAHELSESVGFSKARVEKDLNLYKSNLEKMAQAVELTEQILESERRKR 216 Prochlorococcus marinus
WP_010994822 154 E-QSNPDLVK-DEKQRTEALKSIAAGLHLSDDKFSKDLELYRSNLDKMTQALAVMADMLTADRKKR 217 Nostoc sp. PCC 7120
WP_011359855 138 E-EAKGDADQpDEADLRKRCKELSTALNFPAERVEKDLSLFASNSERMSAAIELVQETIAAERRKK 202 Synechococcus sp. CC9902
WP_011056976 144 Q-ELAGEVTI-H---LNETLDQLAPVIPLPIEKVKRDLELYRSNLDKINQARSLMKELVEQERKRR 204 Thermosynechococcus elongatus
WP_011125071 150 S-NIN--EDK-KEGDDKEIISECVEALGFSKDRVEKDINQYKNSMEKIKEMMELIKLTVEETKRKA 211 Prochlorococcus marinus
WP_010872648 153 A-DQDPEVKD-NDEKRQDYLTRLSELLDLSLDKVVKDLDLYRSNLEKVDQLLKVLEDAAEAERKKK 216 Synechocystis sp. PCC 6803
WP_011128166 138 E-ASSDESDA---SSLRQRAVKLSVDLGLPAERVEKDLTVFSSNSERMEQAVELMQETLAADRRKK 199 Synechococcus sp. WH 8102
WP_011364410 138 KaAAADATDS-DTEAIVKQSKELAEGLGLPTDRVEKDLTLFGSNSERMDQAVELVEETIAAEKRKK 202 Synechococcus sp. CC9605
WP_011132375 152 A-NATDFKDI-KDPEKNKIISDIINKLNLSFNKAEKDIGIYKSSILKMEQAKELLQEAkikdkkek 215 Prochlorococcus marinus
WP_011293825 140 S-EMPLFKEV-KEEDLNKEINDISKSLGYQYSRVEKDISMYKSNIEKMKQALEIIALNLKTK---- 199 Prochlorococcus marinus
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