Conserved Protein Domain Family
photo_alph_chp2

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TIGR03055: photo_alph_chp2 
putative photosynthetic complex assembly protein 2
This uncharacterized protein family was identified, by the method of partial phylogenetic profiling, as having a matching phylogenetic distribution to that of the photosynthetic reaction center of the alpha-proteobacterial type. It is nearly always encoded near other photosynthesis-related genes, including puhA. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 188275
Aligned: 5 rows
Threshold Bit Score: 324.803
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011338130   7 VVALSAIFVWWFSTGILLWrvrH---ADNRGPEAHLTSVILGlPMLFAGAWGYVHTLHDETVGGVYVAFLSALGVWGWIE 83  Rhodobacter sph...
WP_011157112   6 GPPIFAAFVWWFSTGAVLL---L---VGSVGRSELLRAVCAG-GMLTIALCGLSVTAHDVSVGAAYMAFSCIIFLWGAQE 78  Rhodopseudomona...
WP_011388372   6 VPMLYTLFVWWFGTGAVLF-------LDGLPRHTFKWTMLGAtVLFGAGLWGLHATADNTSVGATYSAFTCGFLIWAWQE 78  Rhodospirillum ...
WP_023913728   6 LVALTTIFVWWFSTGAILW---RirrADLSGRAAHMRSVVGGlPLLIGGYIAMANSADDTSVRGAHVAFLSAVSVWGWFE 82  Rhodobacter cap...
WP_003600928   6 VPALYAVLLWWSATGLVLV-------LQHLPRRTHARSMVAAsAVLAGALWTIRAVADDDTETGAYLGFTAAIIVWGWQE 78  Methylobacteriu...
WP_011338130  84 LSFLSGVITGPNTDPCPLHARAPERFLRAVGTVLWHEIVLLTVLIAMAVHAADAPNRFGLWTFLVLFVARVSAKLNLYLG 163 Rhodobacter sph...
WP_011157112  79 IAFLSGWLTGPRAEPCPPGAKGFARFSYALQAIIYHEICLLACGGVVLVVTLGAENQVGLWTYVALWVLRQSAKINLFLG 158 Rhodopseudomona...
WP_011388372  79 VSFYTGWVTGPRKVCCPPGCRGWKHFLHALHANLWHELSMALSAALVVWLTWGAPNQVGTWTFMVLWWMHESARLNVLFG 158 Rhodospirillum ...
WP_023913728  83 LAFLSGVVAGPNRDHCPPFASMTERFLRSVGTLLWHEIGLISALILCAVLVWTGENHFGLWTFATLFFARVSAKLNLFLG 162 Rhodobacter cap...
WP_003600928  79 MSYYMGFISGPKPAACAPNLRGFDRFFAALATSLWHEFAILIGGLAILCLTWGEGNRVALWTYGLLTLMNASARLNLFLG 158 Methylobacteriu...
WP_011338130 164 VPYINVEFLPSTLAHLSSYFRHTRMNRFFPLSVTLLTFATGCWIERALSAGGANHREVGFWLLAALTALAVLEHWFMVVN 243 Rhodobacter sph...
WP_011157112 159 VPVTNDELMPDAVQFLKTYFARKPVSAFFPISVTMATAVLVVMIQRIVEVADTPFEVVGLTLVSTLFALGVVEHWFMLLP 238 Rhodopseudomona...
WP_011388372 159 VRNLNAEFLPEHLAHMKGFLTQKPINLLFPISVTASTVALVVMVMQASDPATSGHHTAGLAMLGALLGLAIIEHWFLILP 238 Rhodospirillum ...
WP_023913728 163 VPRINTQFLPKPLAHLASHFRHARMNFLFPVSITVLTFATGCWMERAADAQTDG-IFIGFVLLTVLTALALLEHWFMVLP 241 Rhodobacter cap...
WP_003600928 159 VRNLHAEFLPPHLGYLACYLSRRPMNPLFPLSVTLGTAASVLLARGALGDAAAPQTVTGFALLATLAALATLEHWFLMLP 238 Methylobacteriu...
WP_011338130 244 LQDRKLWKWMM 254 Rhodobacter sphaeroides
WP_011157112 239 LPAITLWSWGI 249 Rhodopseudomonas palustris
WP_011388372 239 LPFAELWGWYM 249 Rhodospirillum rubrum
WP_023913728 242 LPDQKLWTWML 252 Rhodobacter capsulatus
WP_003600928 239 LPSAALWNWSL 249 Methylobacterium extorquens
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