3ZPN,2KVO


Conserved Protein Domain Family
PS_II_psb28

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TIGR03047: PS_II_psb28 
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photosystem II reaction center protein Psb28
Members of this protein family are the Psb28 protein of photosystem II. Two different protein families, apparently without homology between them, have been designated PsbW. Cyanobacterial proteins previously designated PsbW are members of the family described here. However, while members of the plant PsbW family are not found (so far) in Cyanobacteria, members of the present family do occur in plants. We therefore support the alternative designation that has emerged for this protein family, Psp28, rather than PsbW. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 274409
Aligned: 25 rows
Threshold Bit Score: 122.371
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ZPN_A         24 IQFIRGINEEvVPDVRLTRAR-DGSSGQAMFYFDNPKIVQEGNL---EVTG-MYMVDEEGEIVTRDVNAKFING-----Q 93  Thermosynechoc...
P48264          4 IQFIQGVDEEaIPDVKLSRSQ-DGANGIAKFYFDKPTVFD---VyqgEITG-LYLIDEEGELSTRTVYAKFING-----K 73  Cyanophora par...
NP_849008       4 IQFIQGVDEDiIPTVRLTRSR-DGQTGTAVFRFVQPKLLQQQG----EITG-MYMIDEEGEIVTREVQAKFVNG-----Q 72  Cyanidioschyzo...
NP_914970      12 IQFIQGTDEQtIPDVRLTKSR-DGTNGVAIFTFDQPSVFDSSAEl-gDITG-FYMIDDEGVLQSVDVSAKFVNG-----K 83  Oryza sativa (...
jgi:Tery_2408  11 IQFIQGIDEEvTPEVRLTRSR-SGNQGTATLIFEDPKALGQDVTq--EITG-MYMIDEEGQITSRDVKARFVNG-----Q 81  Trichodesmium ...
BAC88869        4 AQFLEGINEE-ITDIRVMASKyDTSRKTALIYIAAPKAdl------nQVMS-FRMRDEEGEITVRDIRSKHLNG-----K 70  Gloeobacter vi...
AAN71786        8 IELFDGIAEE-LDNVSLRRDR-QSGTRNVLLRFRALKALDRFNSfrsRFSKaIRLTDSEGAIELWPDSSKLVFGgddgdE 85  Synechococcus ...
ZP_00516740     8 IEFFVGISEE-LSNVSLRRSK-QTGIRNVLMIFENLKSLERFRSytnQTYGdLRLIDSEGEISVTPSSLKIIWGgdegdE 85  Crocosphaera w...
WP_010994975    4 IQFSRGLDEEvIPEVRLTRSR-TGDTGTATFIFTNPKILDQGTt--eDITG-MYLIDEEGEIITREVKGKFING-----R 74  Nostoc sp. PCC...
WP_011430265    4 IEFSPGIPEv-PTQVRLLKSK-TGKRGSAIFRFEELK------SdtqSILG-MRMIDEEGELTTRNIKAKFLNG-----E 69  Synechococcus ...
3ZPN_A         94 PVAIEATYTMRSPQEWDRFIRFMDRYAASHGLGFQK 129 Thermosynechococcus elongatus
P48264         74 PQSIEASYIMNNREEWERFIRFMERYAKQNDLSFTK 109 Cyanophora paradoxa
NP_849008      73 PQIIEALYVMKNAQAWERFMRFMNRYAEAKGLSFQR 108 Cyanidioschyzon merolae strain 10D
NP_914970      84 PALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVK 119 Oryza sativa (japonica cultivar-group)
jgi:Tery_2408  82 PKFLEGLYVMKTKQEWERFMRFMESYAKEHDLGFKK 117 Trichodesmium erythraeum IMS101
BAC88869       71 FIGLEISHEMGSDAAWNRFYRFMER------MGYA- 99  Gloeobacter violaceus PCC 7421
AAN71786       86 LDRVEFVVPIDNEDHWQRFMRFMERYAAANDMTYGD 121 Synechococcus elongatus PCC 7942
ZP_00516740    86 LKEVRCGFDLEKDEHWDRFMRFMERYAEANGMAYQD 121 Crocosphaera watsonii WH 8501
WP_010994975   75 PEGLEAVYVMKSAQEWERFIRFMERYAQENDLGFSK 110 Nostoc sp. PCC 7120
WP_011430265   70 FKALEVIYDMETEAEWERFLRFMERFSAANQMGMA- 104 Synechococcus sp. JA-3-3Ab
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