1W5C


Conserved Protein Domain Family
PS_II_C550
?
TIGR03045: PS_II_C550 
Click on image for an interactive view with Cn3D
cytochrome c-550
Members of this protein family are cytochrome c-550, the PsbV extrinsic protein of photosystem II, from both Cyanobacteria and chloroplasts. A paralog to this protein, PsbV2, is found in some species in addition to PsbV itself. [Energy metabolism, Photosynthesis]
Links
?
Statistics
?
PSSM-Id: 274407
Aligned: 21 rows
Threshold Bit Score: 239.956
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
1W5C_T         2 LKKCVWLAVALCLCLWQFTM-G----TALAAELTPEVLTVPLNSEgKTITLTEKQYLEGKRLFQYACASCHVGGITKTNP 76  Thermosynechoco...
BAB69458       2 LRKLILITVATVFFACQLLV-N----PVSALELDEESRTVQYNEQgDEVVISIKEAERGKRLFNDTCAQCHLGGVTKTNP 76  Aphanothece hal...
Q55210        10 LKKFIFGISAFVLLFWQLNV-G----AANATALREVDRTVNLNET-ETVVLSDQQVAKGERIFINTCSTCHNSGRTKSNP 83  Synechococcus s...
ZP_01079498    8 LRRSVSRLLFVLPVLIGLAF-Ss---PALAAQWDAATLTVPADASgDQVTFSEQEIKTGRKIFNTSCGTCHAGGITKTNH 83  Synechococcus s...
ZP_01122935    8 LRRSLSRLLIVLSAFAVLVI-Gt---PAQAASWDAETLTVPADSEgSTVTFTEQQVKAGRKVFNTSCGTCHAGGITKTNH 83  Synechococcus s...
WP_011365092  24 LRRSLKGLLVLIPVLIGLAVtS----PAQAAQWDAETLTVPADPSgTEVTFSDREIDSGRKVFNTSCGTCHAGGITKTNH 99  Synechococcus s...
WP_011127406  19 LQRSLKGLLILVPVLIGLVLaS----PAEAVRWDAETLTVPGNPEgTQVTFSEQEINTGRKVFNTSCGTCHAGGITKTNQ 94  Synechococcus s...
WP_011359346   8 LRQSFKGLLVLVPVLIGLAFiS----PAEAVQWDAETLTVPVNPDgAEVTFTDREINAGRKVFNTSCGTCHAGGITKTNQ 83  Synechococcus s...
ZP_01084046   18 ALRAVARTLLVLPLALLLSL-GfcvtAAQAAQWDTATLTVPGDPDgNLVTFSEAEIKGGRKLFNDSCGTCHAGGVTKTNY 96  Synechococcus s...
WP_011130795   8 LGRSLIKLLIVLPVIIGLSI-Ss---PAMAAQWDAETLTVPAGSGgQQVTFTESEIKSASKLFKSNCATCHNQGVTKTNQ 83  Prochlorococcus...

1W5C_T        77 SLDLRTETLALATPPRDNIEGLVDYMKNPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKW 156 Thermosynechoco...
BAB69458      77 NVGLSLEALERAEPPRDNIAGLIDYMKNPTTYDGEIDIKEIHPNTVRSDILPERRNLTDDDLEAIAAHILSQPKSPRKQW 156 Aphanothece hal...
Q55210        84 NVTLSLVDLEGAEPRRDNILAMVDYLKNPTSYDGELDLSQLHPNTVRADIWSSMRNLNEEDLQNVSGYVLVQAQVRGVAW 163 Synechococcus s...
ZP_01079498   84 NVGLDPETLALATPARDNVDSLVDYMKDPTSYDGEYSIADVHPSMRSSDLFVQMRDLTDDDLRLIAGYILVAPKVQGNQW 163 Synechococcus s...
ZP_01122935   84 NVGLDPETLALATPARDNVAALIDYLQDPTSYDGEYSIADLHPSMRSRDLYPAMRDLTDEDLRLMSAYILVAPKVLGAEW 163 Synechococcus s...
WP_011365092 100 NVGLDPETLALATPARDNVEALVDYMKDPTSYDGEYSIADLHPSMRDAELYPAMRDLDDEDLRLMAGYILVSPKVQGSAW 179 Synechococcus s...
WP_011127406  95 NVGLDPETLALATPARDNVDALVDYMKDPTSYDGEYSIADLHPSMRDAELYPAMRDLTDEELRLMAGYILVAPKVQGTAW 174 Synechococcus s...
WP_011359346  84 NVGLDPETLALATPARDNVDALVDYMKDPTSYDGEYSISDVHPSMRSAELYPAMRDLDDEDLRLMAGYILVSPKVQGSSW 163 Synechococcus s...
ZP_01084046   97 NVGLDPETLSLATPSRDSVEALVDFIKDPTSYDGEYSIADVHPSMRSSDVFVKMRDLDDDDLRLIAGYILVAPKVSGTQW 176 Synechococcus s...
WP_011130795  84 NVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYSIADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQGDQW 163 Prochlorococcus...

1W5C_T       157 GGGK 160 Thermosynechococcus elongatus
BAB69458     157 GDGK 160 Aphanothece halophytica
Q55210       164 GGGK 167 Synechococcus sp. PCC 7002
ZP_01079498  164 GGGK 167 Synechococcus sp. RS9917
ZP_01122935  164 GGGK 167 Synechococcus sp. WH 7805
WP_011365092 180 GGGK 183 Synechococcus sp. CC9605
WP_011127406 175 GGGK 178 Synechococcus sp. WH 8102
WP_011359346 164 GGGK 167 Synechococcus sp. CC9902
ZP_01084046  177 GGGK 180 Synechococcus sp. WH 5701
WP_011130795 164 GGGK 167 Prochlorococcus marinus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap