Conserved Protein Domain Family
PS_II_psb27

?
TIGR03044: PS_II_psb27 
photosystem II protein Psb27
Members of this family are the Psb27 protein of the cyanobacterial photosynthetic supracomplex, photosystem II. Although most protein components of both cyanobacterial and chloroplast versions of photosystem II are closely related and described together by single models, this family is strictly bacterial. Some uncharacterized proteins with highly divergent sequences, from Arabidopsis, score between trusted and noise cutoffs for this model but are not at this time assigned as functionally equivalent photosystem II proteins. [Energy metabolism, Photosynthesis]
Statistics
?
PSSM-Id: 274406
Aligned: 18 rows
Threshold Bit Score: 166.755
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_00672412    2 KSFISRL----LALVLVCAIGLM---GC--SNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQAIARQAINDYAS 72  Trichodesmium e...
ZP_00514356    4 KSALSRI----LALVLVAVVTLT---GCg-NSSSGLSGNYSEDTLAVIETLTTALDLPNDAENKQEIKSLAKEQINDYIS 75  Crocosphaera wa...
WP_011132142   7 TELFSRFfvkaISFAICISVFFTlfnSPsyAAKTSMTGDYAKDTISVVKTLQIAVETPKDSPDKDKVRDESLALITDYIS 86  Prochlorococcus...
WP_011376067   7 SELIIKNltkaISFSLSFIVIFTlfnSPsiAAKTSMTGDYTKDTISVVKTLQIAVDTPKDSPNKDEVRSESLTLITDYIS 86  Prochlorococcus...
WP_011243482   4 ARPLARLf----AIVLVAVIGLT---ACtgGGDSAISGNYRQDTLAVVTSLRNAITLPDDAPEKSAAQAEARQLINDFAA 76  Synechococcus e...
WP_010873082   6 KNQLSRL----LALILVVAIGLT---AC--DSGTGLTGNYSQDTLTVIATLREAIDLPQDAPNRQEVQDTARGQINDYIS 76  Synechocystis s...
WP_010995430   4 KRYWSRL----LALVLVVAIGLV---GCg--SPDSLTGDYRQDTLAVVNTLRQALEITEDSPDKTALQAEARQKINDFSA 74  Nostoc sp. PCC ...
WP_011058295   2 KRFWAMV----CALFLSVSLLLT---SCa-NVPTGLTGNFREDTLALISSLREAIALPENDPNKKAAQAEARKKLNDFFA 73  Thermosynechoco...
WP_011124661   6 HHLIKKTikasLPLFLGLLLIFHpfgQSlaAAKPFMSGDFAKDTVSVAQSLKETIALSDDDGQLSESKDEALALITAYIS 85  Prochlorococcus...
WP_011294472   6 HRLSIRLvraaLAICLGFCLMLFqfaSEvnAAKTLMTGDFAKDTIAVSSTLKETITLPKEDKGLSEAEKEAVFLISDYIS 85  Prochlorococcus...
ZP_00672412   73 RYRRDNSVSSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEFKQVELALKRG 130 Trichodesmium erythraeum IMS101
ZP_00514356   76 RYRRNGESGGLRSFTTMQTALNSLAGYYTSYGNRPLPEKLKKRLKQEFKQAEVAIKRG 133 Crocosphaera watsonii WH 8501
WP_011132142  87 RYRNRGMVNKTQSFTTMQTALNAMAGHYKNFATRPLPDKLKERLTKEFTLAEKMVLRE 144 Prochlorococcus marinus
WP_011376067  87 RYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASRPLPDKLKERLTKEFSLAEKMVLRE 144 Prochlorococcus marinus
WP_011243482  77 RYRRDSRVSGLSSFTTMQTALNSLAGHYSSYPNRPVPEKLKKRLEKEFRMVELALNRE 134 Synechococcus elongatus
WP_010873082  77 RYRRKGDAGGLKSFTTMQTALNSLAGYYTSYGARPIPEKLKKRLQLEFTQAERSIERG 134 Synechocystis sp. PCC 6803
WP_010995430  75 RYQRVNSVSGLNSFTTMRTALNSLAGHYSSYPNRPVPQKLKSRLEQEFKQVESALKRG 132 Nostoc sp. PCC 7120
WP_011058295  74 LYRRDDSLRSLSSFMTMQTALNSLAGHYSSYPNRPLPEKLKARLEQEFKQVELALDRE 131 Thermosynechococcus elongatus
WP_011124661  86 RYRNRPQVNGTSSFTTMQTALNAMAGHYKTFSNRPLPENLKERLNKELTRAEKVVAKE 143 Prochlorococcus marinus
WP_011294472  86 RYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRPVPENLKERLNKELSKAEKLAARD 143 Prochlorococcus marinus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap