Conserved Protein Domain Family
PS_antenn_a_b

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TIGR03041: PS_antenn_a_b 
chlorophyll a/b binding light-harvesting protein
This model represents a family of proteins from the Cyanobacteria, closely homologous to and yet distinct from PbsC, a chlorophyll a antenna protein of photosystem II. Members are not univerally present in Cyanobacteria, while the family has several members per genome in Prochlorococcus marinus, with seven members in a strain adapted to low light conditions. These antenna proteins may deliver light energy to photosystem I and/or photosystem II. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 213761
Aligned: 24 rows
Threshold Bit Score: 403.613
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011125439  13 YWAGNASVTNRSGRFIASHAAHTGMIAFGAGSNTLFELSRFDSSLPMGDQGFVFLPHLASVGIGFDEAGVWTGA-GVVTL 91  Prochlorococcus...
WP_011129875  13 WYAGNSGVTNRSGRFIASHIGHTGLICFGAGANTLFELARYDSALPIGDQGFVVLPHLAGLGIGGIENGVITDSyGMLVV 92  Prochlorococcus...
WP_011125037  13 WYAGNSGTTNRSGKFIAAHAAHAGLMMFWAGAFTLFELARYDSSIPMGNQNLICLPHLAGLGIGGVSNGVITEPyGCTVI 92  Prochlorococcus...
WP_011376817  14 WYAGNSGVVGRSGKFIASHAAHAGLMMFWAGAFGLFELARYDASIPMGAQKLICLPHLAGLGIGGIENGVITETyGIVVI 93  Prochlorococcus...
WP_011364551  13 WWAGNAGVAKRSGSFIAAHAAHAGLIMFWAGAFTLFELARYDGTLPMGEQGLILIPHLAGLGFGVGESSVIVDQqPLIAI 92  Synechococcus s...
WP_010998141  13 WWAGNARFANLSGLFIGAHVAQAALTTLWAGAFTWFEISRYKPEIPMGEQGLILLPHLATLGFGVGVSGQVVNTyPYFVI 92  Nostoc sp. PCC ...
WP_010872575  13 WWAGNARFADQSGLFIAAHVAQAALTAFWAGAFTLFEISRFDPTQAMGDQGLILLPHLATLGWGVGDGGQIVDTyPYFVI 92  Synechocystis s...
WP_011242315  13 WWAGNARFANLSGLFIAAHVAQAALIMFWAGAFTLYEISWLTADQSMGEQGLILLPHLATLGLGVGDGGQVTDTyPLFVV 92  Synechococcus e...
WP_010998142  13 WWAGNARFINLSGRLLGAHIAHAGLIILWAGAMTLFEITKYNPSLPIYEQGLILLPHLATLGFGIGDGGQIIDTyPYFVI 92  Nostoc sp. PCC ...
WP_011431392  21 WLAGNARLVNLSGKLLGAHVAHAGLIMLWAGGMTLFEVAHWDPAQPMGSQGLILLPHLATLGIGVNAEGVATDPyPFFVV 100 Synechococcus s...
WP_011125439  92 AILHLILSMVYGAGGLLHAIYFPDDMQKSNVP-QARKFKLEWDNPDNQTFILGHHLILFGLACAWFVEWAR-IHGIYDPA 169 Prochlorococcus...
WP_011129875  93 AVFHLIFSAVYAGGAMLHSFRYKEDLGEYPQGsRPNKFDFKWDDPDRLTFILGHHLLFLGLGCVQFVEWAK-YHGIYDPA 171 Prochlorococcus...
WP_011125037  93 AVLHLIFSGVLGAGGLLHSMRYEGDLGNYPEGsRAKKFDFEWDDPDRLTFILGHHLIFLGLGNIQFVEWAR-IHGIYDSA 171 Prochlorococcus...
WP_011376817  94 CTLHLIFSAVLGAGGLLHSTKFAGDLADYSETsKPRKFDFEWDDPDKLTFILGHHLIFLGIGAIWFVEWAK-WHGIYDPA 172 Prochlorococcus...
WP_011364551  93 AAFHLVSSAVLGAAGIWHTLRAPRDLSEAEG--RAQKFHFEWSDDKKLTFILGHHLIFLGLGAIAFVEWAK-RHGIYDSA 169 Synechococcus s...
WP_010998141  93 GALHLISSAVLGAGALFHTFKGPRNLKNTTG--SARKFHFEWNDPKQLGLILGHHLLFLGMAALLLVGKAMfWGGLYDAT 170 Nostoc sp. PCC ...
WP_010872575  93 GSIHLIASAVLGAGALFHTLRAPADLSTLKG--QGKKFHFTWENPQQLGIILGHHLLFLGAGALLLAGKAMyWGGLYDAT 170 Synechocystis s...
WP_011242315  93 GAVHLIASAVLGAGALFHTFRAPSDLAAASG--AAKRFHFDWNDPKQLGLILGHHLLFLGVGALLLVAKATtWGGLYDAA 170 Synechococcus e...
WP_010998142  93 GVVHLVSSAVLAAGGIYHALLGPEVLPENNQ--FPGFFGYDWEDEDKMTTIIGIHLLLLGAGAWLLVAKALfWGGLYDST 170 Nostoc sp. PCC ...
WP_011431392 101 GVLHLIASAVLGAGGIFHALLGPEVLAKGET--FAEFFGYDWEDDDKMTTILGIHLLLLGLGAWLLVAKALfWGGLYDAQ 178 Synechococcus s...
WP_011125439 170 IGAVRQV-NYNLDLSMIWERQVN------FLNIDSLEDVMGGHAFLAFAEITGGCFHAIAgstkwedKRLGEYDRLKGAG 242 Prochlorococcus...
WP_011129875 172 MGVVRKV-EYNLDLSMVWNHQID------FLTINSLEDVMGGHAFLAFFLSAGAIWHIFS-------KPFGEYTEFKGKG 237 Prochlorococcus...
WP_011125037 172 QGITRTV-NYNLDLGMIWNHQAD------FLTINSLEDVMGGHAFLAFFLIIGGAFHIAT-------KQYGQYTEFKGKG 237 Prochlorococcus...
WP_011376817 173 IGSTRQV-IYNLDIAAIWNHQFD------FLKIDSLEDVLGGHAFLAFLEIIGGIFHIFT-------KQFGEYTEFKGKG 238 Prochlorococcus...
WP_011364551 170 IGAVRRV-EPNIDLGMVWSYQAN------FLSISSLEDVVGGHAVLAFILTIGGVWHIIS-------RPFGPFKKVL--- 232 Synechococcus s...
WP_010998141 171 TQVVRVVnHPTLNPFVIYGYQTH------FASVNNLEDLVGGHIYVGLILIGGGIWHIVK-------EPLPWAKKLL--- 234 Nostoc sp. PCC ...
WP_010872575 171 TQTVRLVsQPTLDPLVIYGYQTH------FASISSLEDLVGGHIFVGFLLIGGGIWHILV-------PPLGWAKKVL--- 234 Synechocystis s...
WP_011242315 171 SQTVRLVtEPTLNPAVIYGYQTH------FASIDNLEDLVGGHVYVGVMLIAGGIWHILV-------PPFQWTKKVL--- 234 Synechococcus e...
WP_010998142 171 VASVRVItEPTVNPARIFGYLFGafgkqgMAAVNNLEDVVGGHIWVGILCIGGGFWHILT-------QPFAWAKKVL--- 240 Nostoc sp. PCC ...
WP_011431392 179 LGRVRVVtDPTLNPLRIFAYLTplmgqqgMAAVNNLEDLVGGHIYVGLLCVLGGWWHIAT-------RPFAWAKQVL--- 248 Synechococcus s...
WP_011125439 243 LLSAEAILSFSLAGIGWMAIVAAFWCSQNTTVYPIEFYGEPLNRAFVIAPAFVDS-IDYSNGIaplgHSGRCYTANFHYI 321 Prochlorococcus...
WP_011129875 238 LLSAEFVLSTSLAGAAFIAFVAAFWASMNTTIYPTDLYGGPLNIELNFAPYFSDTdPLFGGDL----HSARSWLSNFHFY 313 Prochlorococcus...
WP_011125037 238 LLSAESVLSYSLAGVAYCAFVAAFWCATNTTIYPTDLYGEVLSLKFEFAPYFVDT-ADLPADA----HTARAWLSNVHFY 312 Prochlorococcus...
WP_011376817 239 LLGAEAILSYSVVGVSYMAFVAAFWCASNTTIYPVDLYGEPLKLQFEFAPYFTDT-VDLGSGV----YSARAWLANAHFY 313 Prochlorococcus...
WP_011364551 233 IYNGESILSYSLASVALMGFVTAIWCAQNTTIYPVELYGDPLKLNFAFSPYFSDA-TALEGGA----HSARAWLANTHFY 307 Synechococcus s...
WP_010998141 235 IFSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYGAPLELKFGVTPYFADT-VKLADGG----YSARAWLANAHFF 309 Nostoc sp. PCC ...
WP_010872575 235 LFSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPPEFYGPPLAIKLGIFPYFADT-VELPMHA----HTSRAWLANAHFF 309 Synechocystis s...
WP_011242315 235 IYSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYGAPLEIKLGVTPYFADT-VQLPFGA----HTPRAWLSNAHFF 309 Synechococcus e...
WP_010998142 241 FWSGEAYLSYSLAALAYMGLLAAYFVTVNDTVYPTEFYGP-----LGFSST---------SGV----ISVRTWLATSHFA 302 Nostoc sp. PCC ...
WP_011431392 249 IYSGEAYLSYSLGALAYMGILAAYFVSVNEIAYPVAFYGP-----LGL------------AADemgvVSSRTWLATAHFV 311 Synechococcus s...
WP_011125439 322 AGFFAFQGHLWHALRAM----GYNFK 343 Prochlorococcus marinus
WP_011129875 314 LGFFYLQGHFWHGLRAM----GFDFK 335 Prochlorococcus marinus
WP_011125037 313 LGFFFLQGHLWHALRGM----GFDFK 334 Prochlorococcus marinus
WP_011376817 314 LGFFFLQGHLWHALRAM----GFDFK 335 Prochlorococcus marinus
WP_011364551 308 LAFFFLQGHFWHALRGM----GFNFK 329 Synechococcus sp. CC9605
WP_010998141 310 LAFFFLQGHLWHALRAI----GVDFR 331 Nostoc sp. PCC 7120
WP_010872575 310 LAFFFLQGHLWHALRAL----GFDFK 331 Synechocystis sp. PCC 6803
WP_011242315 310 LAFFCLQGHLWHALRAM----GFDFR 331 Synechococcus elongatus
WP_010998142 303 LAIVFLSGHIWHALRVRvleaGLNFE 328 Nostoc sp. PCC 7120
WP_011431392 312 LGILFLAGHIWHAIRARaaasGFDFQ 337 Synechococcus sp. JA-3-3Ab
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