Conserved Protein Domain Family
arch_PEF_CTERM
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TIGR03024: arch_PEF_CTERM 
PEF-CTERM protein sorting domain
This domain, distantly related to the PEP-Cterm domain described in model TIGR02595, is found in Methanosarcina mazei in four different proteins, as well as in other archaea such as Methanococcoides burtonii. Several proteins with this domain have their genes only a short distance from archaeosortase C, a proposed integral membrane transpeptidase. This family should exclude members of the PEFG-CTERM domain family (TIGR04296), specific to the Thaumarchaeota.
Links
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Statistics
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PSSM-Id: 274397
Aligned: 21 rows
Threshold Bit Score: 34.0316
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
REF_WGS:ABSD:cds.ABOONEI_1036 328 VPEFSmDSPwvILVIIILII--AVVYPRSK 355 Aciduliprofundum boonei T469
REF_WGS:ABSD:cds.ABOONEI_2067 652 VPEFN-AIL--LPVLAITIA--AVIFFRRK 676 Aciduliprofundum boonei T469
EDY35392                      261 IPELNaFFI--LVVAASIVV--IVRLFKKK 286 Aciduliprofundum boonei T469
EDY36249                      338 VPEFSsGLW--IIVIALVAMlgMVRLHNKH 365 Aciduliprofundum boonei T469
WP_011035176                  167 VPEFP-TMA--LPVAAILGL--MFIFGRKK 191 Methanosarcina mazei
WP_011034395                  140 IPEFP-SIA--LPVAAVLGL--VLIFGRKR 164 Methanosarcina mazei
WP_011500023                  436 IPEFP-TIA--LPVMAVLGL--MFLTMRRR 460 Methanococcoides burtonii
WP_011499340                  251 IPEFP-TIA--LPILSVLGL--MFFLQRRK 275 Methanococcoides burtonii
WP_011034049                  135 VPEFP-TVA--LPVAALIGL--VFVFGRKK 159 Methanosarcina mazei
WP_015053995                  154 IPEFP-TVA--LPIAAILGL--AFFFQRRK 178 Methanolobus psychrophilus
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