Conserved Protein Domain Family
pepcterm_polyde

?
TIGR03006: pepcterm_polyde 
polysaccharide deacetylase family protein, PEP-CTERM locus subfamily
Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Statistics
?
PSSM-Id: 274385
Aligned: 14 rows
Threshold Bit Score: 462.182
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_010942624   3 NALSIDVEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELVKEIARRGHEVASHG 82  Geobacter sulfu...
WP_011112348   7 NALTIDVEDYFQVSAFARYIPRSSWDSLPCRVERNIDRILVLLDEHKIKATFFTLGWIAERYPSMVKRIVENGHELASHG 86  Nitrosomonas eu...
WP_011381812   8 NAMTIDVEDYFQVSAFAAHIPRDSWNSISCRVENNIDRILSLLDEREVKATFFTLGWIAERYPAMVRRLVAEGHELASHG 87  Nitrosospira mu...
WP_011310800   3 NALSVDVEDYFQVSAFAPHIPREQWNTLPCRVERNVDLILDLFDESRSKATFFTLGWIAERYPQVVRRIVDNGHELASHG 82  Thiobacillus de...
WP_002809078   9 NAMTVDVEDYFQVSAFENIIARGGWDKLPCRVEQNTDRILQLFADREISATFFMLGWVAERYPTLIQRIVEAGHELASHG 88  Nitrosococcus o...
WP_011238220   7 NALTIDVEDYFQVSALAPHFPRSEWERIPCRVERNVELILELLERHRTSATFFTLGWVAERYPLLVQRIAARGHEVASHG 86  Aromatoleum aro...
WP_011390862  14 NAMSVDVEEHFQVQALAGRVSRDQWDGLESRVEANTGRVLDLFARHGVTATFFTLGWIAERHPGLIRRIVAEGHELASHG 93  Rhodospirillum ...
WP_011396574   3 NALTIDVEDYFHVAALAESISVDEWSNRECRVEKNTRNLLELFDKKGVKGTFFVLGWVAERYPHIVTDIHQAGHEVASHG 82  Hahella chejuensis
WP_011445974  10 NGLSVDVEDWFQVGAFETVIDRSDWDGLDCRVERNCQQILALFADAGVKGTFFTLGWIAERYPALMRRIAAAGHEIASHG 89  Novosphingobium...
WP_004512945   3 NALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWVAERCPDLVREIADAGHEIASHG 82  Geobacter metal...
WP_010942624  83 YGHRRVSTQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRKVLWAFDELLDAGYCYDSSVFPVR-HDLYGIPDWP 161 Geobacter sulfu...
WP_011112348  87 YAHHRVTELSRGQFYDDIARSKFLLEDIGGQSVWGYRAPSFSINKDNLWALDYLEEAGYRYSSSIYPVE-HDHYGMPDAP 165 Nitrosomonas eu...
WP_011381812  88 WGHHRVWELDADEFREDIVRSKALLEDISGQPVLGYRAPSFSIGHQNEWALDLLGDAGYRYSSSIYPIR-HDHYGVPDAP 166 Nitrosospira mu...
WP_011310800  83 YGHERASDLTPAAFREDITRAKRILEDLGGVAVRGYRAPSFSIDHRNWWAVAELEEAGYVYSSSIYPVR-HDHYGMPDAP 161 Thiobacillus de...
WP_002809078  89 FSHIRVTQQNRDDFREDVSRTRKLLEDLSGTAVRGYRAASYSIGRSNLWAHEVLAETGYLYSSSIYPIH-HDLYGMPEAP 167 Nitrosococcus o...
WP_011238220  87 YAHERATAQSPEAFLADIVRARKVLEDLSGQPVTGYRAPSFSIGKTNLWAHDCIAQAGYAYSSSVYPVR-HDHYGMPDAP 165 Aromatoleum aro...
WP_011390862  94 WAHHLVTSQTPEQFRADVRQTKALLEDIGGVAVRGYRAATFSVCPSTLWALGILEEEGYAYSSSIFPVH-HDLYGMPDAP 172 Rhodospirillum ...
WP_011396574  83 YSHQLVYSQTPEVFREETAKSKDILENIIQQPVEGYRAASYSITAKSKWALDILCDLGFKWDSSIFPVR-HDRYGMPNTP 161 Hahella chejuensis
WP_011445974  90 WDHARVFTLGRESFAADIERARKVLEDTTGQRVTGYRAPSFSIDARTPWAHEVLAEQGYAYSSSVAPIV-HDHYGWREAP 168 Novosphingobium...
WP_004512945  83 YGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRAPSFSVNPETPWALDVLVDEGFTYDSSVFPTSfHDRYGFSGSS 162 Geobacter metal...
WP_010942624 162 SHPF--RVvkGNggwepsatapdsedgitgqmpsILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRS 239 Geobacter sulfu...
WP_011112348 166 RFAF--NPtgSRk---------------------ILELPVTTVRLLDRNFPAGGGGYFRLWPYAVSRWFLQRVNSVDRQP 222 Nitrosomonas eu...
WP_011381812 167 RFAY--YPrnNT----------------------LLEVPITTVRLFQRNFPAGGGGYFRLWPYPVSRWFLQRLNHFEERP 222 Nitrosospira mu...
WP_011310800 162 RFPH--RPngERg---------------------ILEVPPTTLPLFGRNLPAAGGGWFRLLPYEMSRWMLKRVNARDGAP 218 Thiobacillus de...
WP_002809078 168 RFAF--YPpaAPs---------------------LLEIPVSTVELSGHKFPCGGGGYFRLFPYGLFRWAVRRVNQLDGQP 224 Nitrosococcus o...
WP_011238220 166 RFPY--RLdnG-----------------------LLEVPVTTMHWLGRNWPAGGGGYFRLLPYVVSRWQIDKVNRDDRRA 220 Aromatoleum aro...
WP_011390862 173 RFAF--HPlpGRa---------------------FIEYPMTTLRLAGRNLPCGGGGYFRLLPLALFRAALSRIQASESQP 229 Rhodospirillum ...
WP_011396574 162 EDPYilQApnGKq---------------------IVEFPLTTCPIGKYRLPIAGGGYFRLFPYWLTRWGLGRVNSL-GRS 219 Hahella chejuensis
WP_011445974 169 RFAF--RPveGAd---------------------LIEIPVTTAEVAGRRMAAGGGGFFRLLPYAVSRWAIRQVNEREGRP 225 Novosphingobium...
WP_004512945 163 LSPF--RFdnG-----------------------LVEVPLSTVRFGGKNIPAAGGGYFRLFPYPFFRYLAKRING-EGRA 216 Geobacter metal...
WP_010942624 240 FIFYLHPWEMDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLA 295 Geobacter sulfurreducens
WP_011112348 223 AIFYFHPWEIDPDQPRQVGISFKTRFRHYLNLGRMEKRLDALIRHFDWGRMDQIFL 278 Nitrosomonas europaea
WP_011381812 223 AIFYFHPWEIDHQQPRQKGISMKTRFRHYHNLHRMENRLRALVRDFRWDRMDRIFL 278 Nitrosospira multiformis
WP_011310800 219 CMFYFHPWEVDPEQPRPSGVSMKARFRHYVNLQRTAGRLRRLLNDFEWDRVDRVFL 274 Thiobacillus denitrificans
WP_002809078 225 CIFYFHPWEIDPEQPRQRGISMKTRVRHYLNLQHMEQRLLWLIGDFRWDRMDRVFL 280 Nitrosococcus oceani
WP_011238220 221 AIFYFHPWELDPGQPRVAAASARTRFRHYLNLERTEERLRHLLGDFSWGRADQVFC 276 Aromatoleum aromaticum
WP_011390862 230 GIFYFHPWEIDPDQPRFDGLPLKSRFRHYVNLDRMAGKLDRLLGAFAWDRLDRVFg 285 Rhodospirillum rubrum
WP_011396574 220 FIFYLHPWEIDPKQPRVK-ASMLSTFRHYNNLDVCFSRLEALLDDFSFTTVSEVLK 274 Hahella chejuensis
WP_011445974 226 AAFYFHPWEIDPDQPRPAVAPLKSRLRHYTNLDVMAAKLSRLVREFRWGRMDEIAA 281 Novosphingobium aromaticivorans
WP_004512945 217 LVFYLHPWELDPEQPRIP-IRHDYRFRHYVNLCKTGRRLDRLLGDFRFGAMGELVA 271 Geobacter metallireducens
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap