Conserved Protein Domain Family
Sig-70_gmx1

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TIGR03001: Sig-70_gmx1 
RNA polymerase sigma-70 factor, Myxococcales family 1
This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found in multiple copies in the order Myxococcales. This model supercedes TIGR02233, which has now been retired.
Statistics
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PSSM-Id: 188267
Aligned: 9 rows
Threshold Bit Score: 266.167
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_002618580  53 FVTHLAQRLPEA---SPqspLEPLLGQLSLAELYLACACERGIPSAIDIFERHYLAKLPGLLRGPKQPDAMIDDVCQLAR 129 Stigmatella aur...
WP_013377011  53 FVRHLSMRLSSQelgGP---LALLLEHLVLADLYIACACVNGVAGAIEALEQHYLGKLPHALAYLRLPEQILDEVCQSVR 129 Stigmatella aur...
WP_011551819  57 FVRHLARHLPE----GK---AAEVMRILQGADLYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPP--LVEEVLQMLR 127 Myxococcus xanthus
WP_002609518  80 FLRSLAARLPAR---GD---VGAALGCVRADDLLLAFACTQNEPLALATLERQVFSQVETWLPG--EDTAVVAEVRQRLR 151 Stigmatella aur...
WP_002618975 121 FLRFLAAR---------------PEGHGQAVDLYLAFACAQADPWALGELERRLESVVGAAITHLRPDRVFVEEVHQRLR 185 Stigmatella aur...
WP_011550215  96 FLRHLASCLPRD---ED---PSRVLASVHAADLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVDPSEVVQHLR 169 Myxococcus xanthus
WP_011552804  55 LLHHVGRHLREE---GT---PLDALKQLHAADVYLACACAQGEPQALQLFEKHVLQKAAARLS--RHLTAMVDEVLQVTR 126 Myxococcus xanthus
WP_002610599  57 FMRHLAHHLPEG--------LGEPLRQLRAADLYLACACAEGERLALQAFEEHILQRVPSRLGSL--PEATVDEVLQVLR 126 Stigmatella aur...
WP_011555959  61 FAHHLGTLLSRA---VD---PVLSLERLHARDVALALSCAQGLPAARALLEQEVLLKLRVPLARIHPSPVFADEVLQALR 134 Myxococcus xanthus
WP_002618580 130 VKILVPTHEGAPKIAEYTGRGALLSWVRVTAVRIAIKLQAVEKPTSSQDADTVFAALPAPGF--DAELDLIKRRHHTDFR 207 Stigmatella aur...
WP_013377011 130 IHLLVGTAESRPRLGEYTGRGALLSWIRVIAVRMALKQGGVGREAPEENVMTLIEAFSEPSS--NAEIDLIKRRYRKEFR 207 Stigmatella aur...
WP_011551819 128 ERLLVGSSNTPPRIASYGGRGPLRTWVSIVAARIASELMGQDERHQLVAEPPEELARMLAPS--DPEYALLREDARQLLV 205 Myxococcus xanthus
WP_002609518 152 QRLPLTGNKLPPKIATFSGRGTLARWARASATRLLIDLKQESPAHIPLEEVSPEADALMGR---DPALSFIRSRYQADFH 228 Stigmatella aur...
WP_002618975 186 QKLLLSREGRPPKLLEYAGKGPLVQWLRAVALREALNLLAQQRAGAPLESGTVLPELAAPGP--DPELTLLKHRYAPEFK 263 Stigmatella aur...
WP_011550215 170 ERLLVPEGDRPARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGmaDVELDYLRKNHREHFQ 249 Myxococcus xanthus
WP_011552804 127 QRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRIGGELLEQTGRHEQSSTPPEALEQLLSRD--DPERNVLQAHSRQALS 204 Myxococcus xanthus
WP_002610599 127 ARLLLKRGEARARIADYSGRGPLLAWVRIIATRIAGELASQQGRQDLFDEPPEVFARMLAAD--DPERELLREDSRRVLM 204 Stigmatella aur...
WP_011555959 135 ANLLMPRAEAPSRLLGYAGAGPLLHWVSISATRLALRMRKALGEASHVEAE-VLAEHPAPG---GLELGFVREEARGHVR 210 Myxococcus xanthus
WP_002618580 208 QAVSEAFTVLSNDERHLFRLYFVDQLSMYELAALFRVNQSTVSRWLKTARQRVYEETQRRLQARLGLSSRDFKSFLAVLD 287 Stigmatella aur...
WP_013377011 208 QAVRDAFSALSDDQRHLLRLHFIDRLSTIEMGPLFQVNQSTISRWIKSARQTVYEGTKSRLQERLRLSTREFESLLAEIE 287 Stigmatella aur...
WP_011551819 206 ESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMYGGSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVS 285 Myxococcus xanthus
WP_002609518 229 QAFQEALGTLTPRERSLLRLHHVDNLSVDSVGTMYQMSRSTAARWIVQAREHLIERTREALAARLKLEPPELESLLGLLR 308 Stigmatella aur...
WP_002618975 264 AALEAALRGLPARERNFLRLFFLESLTVEQIARMDGTHKSTVSRRMASARERVLTGMRRQLQERLALSVSELDSLVGQLR 343 Stigmatella aur...
WP_011550215 250 AALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARAREAALEGTRQRLAERLRLTSGELHSLMRVVQ 329 Myxococcus xanthus
WP_011552804 205 ESLQAALATLSERERALLRLHHLHGLTMDRIATLYAEPRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQ 284 Myxococcus xanthus
WP_002610599 205 EALRKALAAMPERERALLRLHHLHGLTMDRLSAMYGESRSGVARRVIQARERLLALTHAELALRLNLAGPEVQSLLGLVR 284 Stigmatella aur...
WP_011555959 211 AAFVRAVASLDDEDRELLRLHFVERLSLERMGALFDLHKSTLSRRLTAVQSLLEKRTRRALAERLSLPEPEVDSVMRAIH 290 Myxococcus xanthus
WP_002618580 288 SQLELGISQLLR 299 Stigmatella aurantiaca
WP_013377011 288 SQMDVGLSQVLD 299 Stigmatella aurantiaca
WP_011551819 286 SRLDISLLGLLD 297 Myxococcus xanthus
WP_002609518 309 SHLEVSLHRLLQ 320 Stigmatella aurantiaca
WP_002618975 344 SQLDVSLAHALE 355 Stigmatella aurantiaca
WP_011550215 330 GELDlslpslls 341 Myxococcus xanthus
WP_011552804 285 SRLDLSLHRLMS 296 Myxococcus xanthus
WP_002610599 285 SRLDFSLNRLME 296 Stigmatella aurantiaca
WP_011555959 291 GRLDLSLSGLLE 302 Myxococcus xanthus
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