Conserved Protein Domain Family
rpt_mate_G_obs
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TIGR02996: rpt_mate_G_obs 
repeat-companion domain TIGR02996
This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.
Links
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Statistics
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PSSM-Id: 274381
Aligned: 36 rows
Threshold Bit Score: 59.1842
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010049360   3 ERAGFLNAIRSAPADDTARLVYADWLDELQDPtdfDRAtsAFIRMSC 49  Gemmata obscuriglobus
WP_010047359   4 DEAALLRAIAAHPGEVTARLAYADWLDEHGRG---IEA--AWVRDEg 45  Gemmata obscuriglobus
WP_010040299   5 EEVALYRAILADPHEDTARLVYADWLQENAEP---AHA--DLIRTQC 46  Gemmata obscuriglobus
WP_029601113   3 pDNPLLQALIAEPEDDTLRLAMADWFDENDDP---ARA--ELVRVQV 44  Gemmata obscuriglobus
WP_010046259   5 DDVAFQRALLANPADTTLKLVYADWLQDRADP----RA--EFVRLQV 45  Gemmata obscuriglobus
WP_010037152   3 EEAGFLAAIGLAPAEDTTRLAYADWLDEQSDPgcrAKA--EFIRLET 47  Gemmata obscuriglobus
WP_010036383   9 EDKQFLRAILAEPAELTAWLAYADWLDEYEER---DRS--EFLRLEV 50  Gemmata obscuriglobus
WP_010042783   3 EDEAFIRAIVDSPGDDTPRLVYADWLDDRADP----RG--PYLRAER 43  Gemmata obscuriglobus
WP_010047703   3 EDEPFIRALLAAPDDRTARLVYADWLDDRSDP----RA--EYLRLSA 43  Gemmata obscuriglobus
WP_010048364   4 DERGFLATLDTNPNDHTARAAYADWLDEQGRR---YEA--AIERGRA 45  Gemmata obscuriglobus
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