Conserved Protein Domain Family
succ_dehyd_cytB

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TIGR02970: succ_dehyd_cytB 
succinate dehydrogenase, cytochrome b556 subunit
In E. coli and many other bacteria, two small, hydrophobic, mutually homologous subunits of succinate dehydrogenase, a TCA cycle enzyme, are SdhC and SdhD. This family is the SdhC, the cytochrome b subunit, called b556 in bacteria and b560 in mitochondria. SdhD (see TIGR02968) is called the hydrophobic membrane anchor subunit, although both SdhC and SdhD participate in anchoring the complex. In some bacteria, this cytochrome b subunit is replaced my a member of the cytochrome b558 family (see TIGR02046). [Energy metabolism, TCA cycle]
Statistics
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PSSM-Id: 274370
Aligned: 36 rows
Threshold Bit Score: 77.609
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAG19654         4 QSRPLvgmsesYdrglvADFGRWTeFSAGMWAWVFHKFTGWVLVG-YLFTHISVLSTSLQGAQVYnSTLSGl--ESLAIV 80  Halobacterium...
P51055           3 AKRPV------N-----LDLTKFH-FPPMAILSIGHRISGFVLFL-CMPLMFYLLHRATASAESF-YHLHQl-lLHNGWI 67  Coxiella burn...
MBL:BPEN337      5 NQRPI------Y-----LNIRTIR-FPITAITSILHRISGILLFI-IIGPILWILKLSLSSNNEF-CKIHRfllMNHYIF 70  Candidatus Bl...
BAC24569        16 KYKPI------N-----LNLFTIN-FTKTAISSILHRISGVSVFL-SFGFFLWILDLSLSSEKEF-NYIHQl-iFTTILI 80  Wigglesworthi...
CAI09952         8 KQRPK------F-----LALHEIR-LPLPGFVSILHRVSGAGLFL-MLPFLLFLFDRSLGSPESF-ETYKSv--VANPLA 71  Aromatoleum a...
CAB84405         4 KPRPV------Y-----LDLPNIR-LPIPGIVSILHRISGVGLFI-MLPFLLYFLSGTLSQESAF-ETYRAi--VSHPLV 67  Neisseria men...
jgi:Tbd_1182     4 VPRPV------Y-----LDLFRIH-LPLPGWVSILHRVSGALLFL-ALPTGVWLLSVSLSDEAGY-RYVSEv--FAHPLA 67  Thiobacillus ...
jgi:Nmul_A0863   3 KKRPK------Y-----LDLLKIR-QPLPAVISILHRISGALLFFpGIPLVLCGLDMALGSSEDY-ARLQSf--LNNPMA 67  Nitrosospira ...
jgi:ReutA_2325   7 KARPE------FrnigiSQIAKYR-LPWAGKVSILHRVSGAMMFL-LLPFVLYLFEQSITSELSF-AKFSAl--LSGGFV 75  Ralstonia eut...
jgi:Noc_2473    17 NPRPI------F-----FNLALIR-FPANAVVSALHRISGVILLF-FIPVVVYLLDFSLRDKESF-VWVTEf--FSSLPV 80  Nitrosococcus...
AAG19654        81 RLLEVGLLAVAVFHILNGIRLLFVDLGVGl-eAQDKSFYASLVLTGVIVVASVPTFL 136 Halobacterium sp. NRC-1
P51055          68 KLAVWIMLSATLFHLFAGIRHLAMDLGFWe-sVPEGRISAYTVFVVSFIAIVLAGVW 123 Coxiella burnetii RSA 493
MBL:BPEN337     71 QFVFWTVTILLSYHIIAGIRQILMDFGCLnqtLLIGKISAKVVFVLTILLSIFIGIL 127 Candidatus Blochmannia pennsylvanicu...
BAC24569        81 KIILWIITTVFFYHIIFGLRHILIDFNFSsedLKTANKTANISFFIVIVISIILGIY 137 Wigglesworthia glossinidia endosymbi...
CAI09952        72 KLLLLGLLWAYLHHFCAGIRFLLLDLNKGt-dLKSARNSSRIVLVVSIALTIIIGVK 127 Aromatoleum aromaticum EbN1
CAB84405        68 KLVLIGVLWAYLHHSLAGIRFLFLDAHKGl-eLNTARNTAKAVFASALVLTVVLGAL 123 Neisseria meningitidis Z2491
jgi:Tbd_1182    68 RTATLVLVWAASHHFFAGLRHLALDVHWGe-dLASARRSSLAVMVAAGLAT---GLA 120 Thiobacillus denitrificans ATCC 25259
jgi:Nmul_A0863  68 KFGLILALWFFLHHFCAGIRYLALDLHYGv-kLEQARLSSKVVVGAGIVLTLLTGAV 123 Nitrosospira multiformis ATCC 25196
jgi:ReutA_2325  76 KLVVLALIWGYLHHFCAGIRFLLLDVHVGv-sKPASAKSAISVLVVSLLLTLIFGLK 131 Ralstonia eutropha JMP134
jgi:Noc_2473    81 RLVGIVALWALLHHIFAGIRFLLFDIHMGk--IVKDYRPSWSARITSILALVVTLLI 135 Nitrosococcus oceani ATCC 19707
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