Conserved Protein Domain Family
penta_MxKDx

?
TIGR02953: penta_MxKDx 
pentapeptide MXKDX repeat protein
Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.
Statistics
?
PSSM-Id: 131998
View PSSM: TIGR02953
Aligned: 10 rows
Threshold Bit Score: 48.6884
Threshold Setting Gi: 27352694
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
BAC89096             22 NLLMAAALALSVpaaFAAQPILLAQagDAMKGDAMKgdamkGDAMKKsDAVKKsDAMKGDAM-KGDAM--KGDAMKGDA- 97  Gloeobac...
jgi:Bcep18194_A4332   2 KKVLIAACVAAF---ATIATGAYAQn-DAMSQPGSSm---sKDAMGH-DAMAK-DAMGHDAM-KKDGM--KKHAMKKDA- 68  Burkhold...
CAH35286              3 RNLIAFACVAGF---ALAAPFAHAQn-DAMSKDGMGm---sKDAMSK-GAMSG-DAMSKDAM-SKDRMgkRHDHMAKGG- 71  Burkhold...
CAE27985              4 TRIVLALMIAAFsssLAMAPAAYAM--DKMEK---------KDGMAH-DSMAK-DSMSKDGM-KKDTM--AKDGMKKDG- 66  Rhodopse...
BAC49696              5 TRIALGVSVAALslgLALSPAAFAQ--DKM-----------GDKMGKeDGMMKkNTMSKDGM-KKDAMt-KDDGMKKDH- 68  Bradyrhi...
jgi:Daro_2593         2 KTITSSIFAACL---MLVGSSAFAD--DMMKKDAMSndgmaKDGMKK-ETMSK-DHMAKDGM-KKDAM--TKDGMKKDA- 70  Dechloro...
CAC14885              2 NKIAAILLSIGF---LSIADGALAQ--DGMKKDTMA-----KESMAK-------EAMTKDDM-KKPTM--GKDAMAKDG- 60  Ideonell...
CAD14151              3 KRLVLLISAGMF-----LAGNALAQ--DTMKKDEMG-----KDAMGQsGSMAK-DTMGKDHK-SKSH---TKKMHEKGG- 64  Ralstoni...
AAK88010              2 TRIFTAIATASLfsvLSFAGIAHA---DSMKTDTMK-----KDTMHS-DMMKA-ETMKKDGM-SMTS---KKDCMHKAG- 66  Agrobact...
AAL53314             14 KHNIIAFSALALiagFSLTPAAFAE--DAMKTDHMK-----SDAMKS-------DNMSKDAMgKEDAM--KGDAMHKDSk 77  Brucella...
BAC89096             98 -M-KGDAMKGDAM 108 Gloeobacter violaceus PCC 7421
jgi:Bcep18194_A4332  69 -M-KKDAMSHDEM 79  Burkholderia lata
CAH35286             72 -M-KAGPMSKDAM 82  Burkholderia pseudomallei K96243
CAE27985             67 -M-SKDSMSKDQM 77  Rhodopseudomonas palustris CGA009
BAC49696             69 -M-SKDGMKKDDG 79  Bradyrhizobium diazoefficiens USDA 110
jgi:Daro_2593        71 -M-KKDGMAKDPM 81  Dechloromonas aromatica RCB
CAC14885             61 -MmKKDGMKKGAM 72  Ideonella dechloratans
CAD14151             65 -M-SKDAMGKDAM 75  Ralstonia solanacearum GMI1000
AAK88010             67 -M-QKDKMKKADM 77  Agrobacterium fabrum str. C58
AAL53314             78 kMkKHDAMKGDAM 90  Brucella melitensis bv. 1 str. 16M
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap