Conserved Protein Domain Family
SigM_subfam

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TIGR02950: SigM_subfam 
RNA polymerase sigma factor, SigM family
This family of RNA polymerase sigma factors is a member of the Sigma-70 subfamily (TIGR02937) and is restricted to certain lineages of the order Bacillales. This family encompasses at least two distinct sigma factors as two proteins are found in each of B. anthracis, B. subtilis subsp. subtilis str. 168, and B. lichiniformis (although these are not apparently the same two in each). One of these is designated as SigM in B. subtilis (Swiss_Prot:
Statistics
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PSSM-Id: 274361
Aligned: 5 rows
Threshold Bit Score: 202.685
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAD76011         1 MRLYSKSLFRYLYRLTNDYHLAEDLLQETFYKVYLHVSGISDiAQIKPWLYRIAYNTFIDHCRKAKKMQLVqaddFFASL 80  Geobacillus k...
tigr:GBAA_1113  11 YSEHMQDLFRYLLSLTGDSHFAEDLMQETFYRMLVHIDYYKG-EEIRPWLFTIAYNAFIDWYRKEKRYKTT----TITEF 85  Bacillus anth...
novoz:BL02851    7 YQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDH-SKVKPWLFQVARNAFIDYVRKHKKEVTIsd-dMIGNL 84  Bacillus lich...
novoz:BL02968   13 YREYYHDIMYYLYRRTHQLETAKDLAQDTFLKAFAGLESFRGhSSIKTWLYTIAHHTFINWYRKDKKIQFSdv-aACGDM 91  Bacillus lich...
BAC13254        10 YIKFAPSVFQYAYQLSKSKQVAEDLTQETFLQATIHLHTFKD-ESVRSWLFRVTRNAYIDEWRKKVKRQHIwfhkLLPQK 88  Oceanobacillu...
BAD76011        81 KL-DPLLETENAFLQKYELELIYKHLSTMRELQQKAIMLVDLKGFSYKEAAELLNVKLPYLKSLVFRGRRELEKRLR 156 Geobacillus kaus...
tigr:GBAA_1113  86 HL-PNVPSTEHSYFIKHEIASWLDRLSSLPLERRNVLLLRDYYGFSYKEIAVMTGLSLAKVKIELHRGRKEMKSIKE 161 Bacillus anthrac...
novoz:BL02851   85 FQ-NAVQSPAHQVEIK---EVLTLYMNQLPDNYREALTLYYLKELNYKEASSLMNISEANFKSVLFRARQRLKALYN 157 Bacillus licheni...
novoz:BL02968   92 EQ-HTFEMPERHLANAIMQEELKHHIDRLKEDYQTVLILREFQELSYEEIAEVLNWKLSKVKTNLHRARLELKKSLE 167 Bacillus licheni...
BAC13254        89 EIlSPYGLPEQELLGKEISQNITQLLQFLPENYRTVIYLREFEEFSYHEIMQTTELSENQVKVTLFRARKRLQQLVI 165 Oceanobacillus i...
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