Conserved Protein Domain Family
anti_SigH_actin
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TIGR02949: anti_SigH_actin 
anti-sigma factor, TIGR02949 family
This group of anti-sigma factors are associated in an apparent operon with a family of sigma-70 family sigma factors (TIGR02947). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria. [Transcription, Transcription factors]
Links
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Statistics
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PSSM-Id: 188261
Aligned: 6 rows
Threshold Bit Score: 96.3668
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAS05873      18 DDSHGAVGCAEV-IRQVWLLLDGECGPDTREQLRRHLEACPGCFKHYGLEERIKALIATKCKGEKAPEGLRERLRLEIRR 96  Mycobacterium a...
BAC70748       3 CGEPHETDCSEV-LDHLYEFLDHEMPDSDCTKFEVHFEECSPCLEKYGLEQAVKKLVKRCCGQDDVPTDLRAKVMGRIDL 81  Streptomyces av...
CAI37796       3 KDNSRKTDCDDL-LDVLYEVADGDADWESRERLRAHADACPECLRQLGIEQQVRDLLRSCC-NQPAPVELRARICTQLRV 80  Corynebacterium...
AAT83013       5 QSAGNKESCYWV-IDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRALKRCNRTVAAPMQLRSRLV-QMHV 82  Propionibacteri...
WP_011692491   2 SDCQGLGDCDDArMQRIYEYLDGALTHSDIAEIKDHLDGCPECLEEYDLECVIRKVVKRSC-TEAAPENLKSAILDRIHA 80  Arthrobacter sp...
WP_009747918  20 ADGSQDCSCAEA-RAHLEAFLDRECTADLAERLAQHVATCSHCSRLADAETHLREILRSRC-AEQAPPELRARVLGRLSA 97  Actinomyces sp....

AAS05873      97 TTIIR 101 Mycobacterium avium subsp. paratuberculosis K-10
BAC70748      82 IRSGQ 86  Streptomyces avermitilis MA-4680 = NBRC 14893
CAI37796      81 ISYRV 85  Corynebacterium jeikeium K411
AAT83013      83 TYRWE 87  Propionibacterium acnes KPA171202
WP_011692491  81 IRPVE 85  Arthrobacter sp. FB24
WP_009747918  98 LRata 102 Actinomyces sp. oral taxon 175
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