Conserved Protein Domain Family
SigH_actino

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TIGR02947: SigH_actino 
RNA polymerase sigma-70 factor, TIGR02947 family
This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and (with the exception of a paralog in Thermobifida fusca YX) one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria and each gene examined is followed by an anti-sigma factor in an apparent operon.
Statistics
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PSSM-Id: 131992
View PSSM: TIGR02947
Aligned: 3 rows
Threshold Bit Score: 368.531
Threshold Setting Gi: 50840347
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAT83014      13 VAEETKTQRAQRFERDALEYLDQLYGAALRMTRNPADAEDVVQEAYAKAFSSFHQFRPGTNLKAWLYRILTNTYINSYRK 92  Propionibacteri...
BAD59435      20 GTPVDEAELAQRFERDALPLLDQLYGAALRMTRNPADAEDLVQETYVKAFQGFKSFKEGTNLRAWLYRILTNTYINSYRK 99  Nocardia farcin...
WP_011692492  54 VVSETSEQRRLRFERDAMQYVDQLYSAAMRMARNPADAEDLVQEAYTKAFSAFHQYKPGTNLKAWLYRILTNTYINLYRK 133 Arthrobacter sp...
AAT83014      93 AQRRPQTSDDQDVEDWQIAKAASHDSNGLRSAELEALDGLPDQQILDALDGLSDEFRQVVLLADVEGFAYKEIAEIMGTP 172 Propionibacteri...
BAD59435     100 KQRQPAQYPTDEITDWQLAATAEHTSTGLRSAEVEALDALPDDDIKAALQELPEEFRMAVYYADVEGFPYKEIAEIMGTP 179 Nocardia farcin...
WP_011692492 134 RQREPLQSNSDTIEDWQLARAESHTSSGLRSAEAEALDHLPDSDVKRALQAIPEEFRLAVYFADVEGFAYKEISDIMNTP 213 Arthrobacter sp...
AAT83014     173 MGTVMSRLNRARKQLRKQLVDVAGARGIGPRAG 205 Propionibacterium acnes KPA171202
BAD59435     180 IGTVMSRLHRGRKQLKGLLADVARERGFNRSER 212 Nocardia farcinica IFM 10152
WP_011692492 214 IGTVMSRLHRGRKMLRDMLGDYAAERGFKAATE 246 Arthrobacter sp. FB24
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