Conserved Protein Domain Family
Sigma_B
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TIGR02941: Sigma_B 
RNA polymerase sigma-B factor
This sigma factor is restricted to certain lineages of the order Bacillales including Staphylococcus, Listeria, and Bacillus.
Links
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Statistics
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PSSM-Id: 131987
Aligned: 3 rows
Threshold Bit Score: -1
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
BAC12586   1 MTTKSQPHNKGGDEVYQWIEYLQKDpTNEEIQEKIVLKYQDLVGSIARKYSKNSAIHEDLVQVGMIGLLAAVRRYDPTYG 80  Oceanobacillus ihey...
BAB43151   2 AKESKSANEVSPEQINQWIKEHQEN-KNTDAQDKLVKHYQKLIESLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDMSFE 80  Staphylococcus aure...
AAT53253   2 MEIQSQPTNLTKEDVIKLIAEFQQN-QCGEAQERLVDHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIG 80  Bacillus anthracis ...
BAB43151   2 AKESKSANEVSPEQINQWIKEHQEN-KNTDAQDKLVKHYQKLIESLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDMSFE 80  Staphylococcus aure...
AAT53253   2 MEIQSQPTNLTKEDVIKLIAEFQQN-QCGEAQERLVDHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIG 80  Bacillus anthracis ...

BAC12586  81 KSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIRKGVDELTTDNQKSPTVAEIAKYIGTSEEEVLETMEMGQSY 160 Oceanobacillus ihey...
BAB43151  81 RKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIKKVSDELTAELERSPSISEIANRLEVSEEEVLEAMEMGQSY 160 Staphylococcus aure...
AAT53253  81 NAFEPFAIPTIVGEIKKYLRDKTWGIHVPRRIKDLGGKIKLAIEELTDHLQRSPKIIEIADHLGLSEEEVLEIMDAKNNY 160 Bacillus anthracis ...
BAB43151  81 RKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIKKVSDELTAELERSPSISEIANRLEVSEEEVLEAMEMGQSY 160 Staphylococcus aure...
AAT53253  81 NAFEPFAIPTIVGEIKKYLRDKTWGIHVPRRIKDLGGKIKLAIEELTDHLQRSPKIIEIADHLGLSEEEVLEIMDAKNNY 160 Bacillus anthracis ...

BAC12586 161 KALSVDRKIEADSDGSTVAILDLVGNSEDGYDNVEQRMMLEKILPILSEREQQILECTYFKNMSQKETGELLGISQMHVS 240 Oceanobacillus ihey...
BAB43151 161 NALSVDHSIEADKDGSTVTLLDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVS 240 Staphylococcus aure...
AAT53253 161 RVSSLDDVVENASDGSSVARIESVGEVEQGYEQTERRLVLKDIFNVLNETEKSVIHYIFEENLNQKDTGERLGISQMHVS 240 Bacillus anthracis ...
BAB43151 161 NALSVDHSIEADKDGSTVTLLDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVS 240 Staphylococcus aure...
AAT53253 161 RVSSLDDVVENASDGSSVARIESVGEVEQGYEQTERRLVLKDIFNVLNETEKSVIHYIFEENLNQKDTGERLGISQMHVS 240 Bacillus anthracis ...

BAC12586 241 RLQRRSLRKLREAIQS 256 Oceanobacillus iheyensis HTE831
BAB43151 241 RLQRTAIKKLQEAAHK 256 Staphylococcus aureus subsp. aureus N315
AAT53253 241 RIKRQAISKLKQAAFL 256 Bacillus anthracis str. Sterne
BAB43151 241 RLQRTAIKKLQEAAHK 256 Staphylococcus aureus subsp. aureus N315
AAT53253 241 RIKRQAISKLKQAAFL 256 Bacillus anthracis str. Sterne
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