Conserved Protein Domain Family
bacill_yteA

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TIGR02890: bacill_yteA 
regulatory protein, yteA family
Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General]
Statistics
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PSSM-Id: 274340
Aligned: 10 rows
Threshold Bit Score: 211.821
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM24776         4 EKLMHFKNLLLKEKNKVLSTIHRMNLNDGig--gIAQREYYQELSLLDNHPADMASEVYEVEKNYALKDNEKNILRQIED 81  Caldanaerobac...
tigr:GBAA_5114   5 QQINQFKSVLEKQKQELEQTIQTHENEDR-----ASERESVGELSSYDNHPADMATELYERQKDFGLIELWHKQLEDTKH 79  Bacillus anth...
BAB06263         2 QQYAELRERLTERKAALEQRLKQ-SGELGmqeekGTLSGSTGELSQYDNHPADTATDLYEREKDIALYEQMSREYEEIKQ 80  Bacillus halo...
BAD64876         3 QKWLKLKQALQQQKHELEQTLAN-----------QINDHDTGELSQYDNHPADTATDLFEREKDQAVHNHIKDELHEVEH 71  Bacillus clau...
AAC00368         5 EQLQHLKNELEQTKKDILNRFKD-NDHFQln--sAFPYDSWGELSAYDNHPGDQATELYEREKDIALDLHEREHLRDIEH 81  Bacillus subt...
BAD77163         5 EQLAALRSRLLDMKRETEDRLKQ-NDHFGmi--rSHAHDAVGELASYDNHPADEATELYEREKDLALKEHAEREVREIER 81  Geobacillus k...
BAC12538         5 QQQLQCKEALLQRQSTLIEQVQRHTFGLDv----EFAREDVGELSNYDNHPGDTGTELFEREKDIALQEHTEKELEDINA 80  Oceanobacillu...
AAK80074         4 KKLDYFKNKLMFERKSLMELIEQMRKNDTi----DSKMEIASELSYYDNHPSDLASEFNDIQRGMAFRKNEEALLNKIGN 79  Clostridium a...
tigr:CHY_1507    1 MDIAIFKKMLLKLKEEYEKRLLELKKSEE-----NPFFESTQELSFYDNHPGDLGSESFERSKDFALIDNLKLKLRQIDE 75  Carboxydother...
BAD40226         1 MQIEELRQMLLQEREAYQRQVAM-IEETGl---gTSQGDQLQEDSTVDNHPADLGTETFERSKDLGLRSHMLRRIQEIES 76  Symbiobacteri...
AAM24776        82 ALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAKEKDLslkdlKNSRPNEEKVIKYPFGWGYKDKk--gEIQFDA 159 Caldanaerobac...
tigr:GBAA_5114  80 ALQKIEAGTYGICEVSGEEIPFERLEAMPTATTCIQHTTNKLN-----METRPVEEEVLSPSFHKHDEDH----SVEYDA 150 Bacillus anth...
BAB06263        81 ALDRMENGTYGICERTGEQIPYERLEANPTARTTVAYGNGQL------PANRPVEEDVLE-SFDRYNFDEsd-dETEFDA 152 Bacillus halo...
BAD64876        72 ALEKFNDGSYGICEKTGKAIPYERLEAYPAARTVVEESRPF-------EEYRPVEEDVLK-GFEAYNNDDk--dATFFDG 141 Bacillus clau...
AAC00368        82 SLKAIENGTYGICEVSGKEIPFERLEALPTATTLAEYSSQDVV-----SKDRPIEEET---PFGQFEFDDdeeiRAPYDS 153 Bacillus subt...
BAD77163        82 ALGAIADGTYGTCRVCGRPIPYERLEALPTTLYCREHSPDQTV-----SQKRPLEEGVLMPPFGKFDFDDra-eSVAYDA 155 Geobacillus k...
BAC12538        81 ALHAIEEGTYGICTVCGEDIPHERLEAIPTTDRCVKHANEGGR-----ERYRPTEEQSYSPNLNPDEKYEd--eQNVYDR 153 Oceanobacillu...
AAK80074        80 AIDKVEHGGYGICEVCGKPISEERLEFVPYAENCVECQNKLNDsmpreKNDRPPEEDVLGYPF----YDGn--iRNAFDL 153 Clostridium a...
tigr:CHY_1507   76 AIALINQGKYGLCIDCGQKIPVDRLFANPVAIRCVACQKRVEErt--vPSIRPVEEQVLSPFMEKFNHDNt--sQTLFDG 151 Carboxydother...
BAD40226        77 ALQRMDQGTYGICEECGRPIDPERLKAFPSATTCITCQQRREArp--dRFVRPIEELVTGPPFSRSFRDRs--gDPGYDG 152 Symbiobacteri...
AAM24776       160 EDTFQEVARF 169 Caldanaerobacter subterraneus subsp. tengcongensis MB4
tigr:GBAA_5114 151 EVAWQDVANY 160 Bacillus anthracis str. 'Ames Ancestor'
BAB06263       153 EDAYQAVGRF 162 Bacillus halodurans C-125
BAD64876       142 EDAYQSVARF 151 Bacillus clausii KSM-K16
AAC00368       154 EDSYQDVEKY 163 Bacillus subtilis
BAD77163       156 EDAWQEAARY 165 Geobacillus kaustophilus HTA426
BAC12538       154 EDTWQDVSRY 163 Oceanobacillus iheyensis HTE831
AAK80074       154 EDSYEKVQEF 163 Clostridium acetobutylicum ATCC 824
tigr:CHY_1507  152 EDSWQAVANF 161 Carboxydothermus hydrogenoformans Z-2901
BAD40226       153 EDAWQEVGQY 162 Symbiobacterium thermophilum IAM 14863
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