2YEV


Conserved Protein Domain Family
CoxB

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TIGR02866: CoxB 
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cytochrome c oxidase, subunit II
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. [Energy metabolism, Electron transport]
Statistics
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PSSM-Id: 274329
Aligned: 9 rows
Threshold Bit Score: 234.582
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YEV_B          27 PGGSFNQEVAFLfpwVYFFSFLIFLVVAGSLAYVTWKFRAr---pEDQE------------EPPQihgndRLEVVWTLIP 91  Thermus therm...
Q9YDX7           5 PTEAIWWRLFLL---FTAVGVLAAGTVTAFFIYSLFKYRSsgqalGEDQgtagriyrimveSPVSg----KSKYLLFVTG 77  Aeropyrum per...
vng:rrnAC2310   22 APSAVFEQIFEV---FLLLGTAVGVVVVAYTMYHALKYRDdg--sGTDPyadkverpemgeLPTGgtggrKVFYSFSISA 96  Haloarcula ma...
CAE77943        16 QGTEIAKQVDNLygfLLVTSLIACVLVIGGMIYFVWKYRRk----SSND------------KTAYishntALEFLWSFIP 79  Bdellovibrio ...
mpdneb:Wbm0308  31 PATEIMEVIVKShlfVMSVMVTIMLFVWALLAYVMFRFRK-----SKVT------------NISKthhsiLLEIVWFVIP 93  Wolbachia end...
BAD64928        33 PKGPAAQWIYDNmllSIAVMTFVSIVVFVIFFLVIFKFRRk---dGDEE------------LPKQvhgntAMEITWTVIP 97  Bacillus clau...
AAS82014        27 PGGSFNQEVAFLfpwVYFFSFLIFLVVAGSLAYVTWKFRAr---pEDQE------------EPPQihgndRLEVVWTLIP 91  Thermus therm...
jgi:Nwi_2313    41 PAGPAAASTATLwwiMFSGAAVLSLLMAALIALAFLKPG----------------------IASMwssrsWIIYGGLVMP 98  Nitrobacter w...
AAG19159        33 ATEELIRNLNSQ---LVAAAITITLLVEGILVYTVWKFRN-----ADEA------------KPTKen--rRLEITWTVAT 90  Halobacterium...
2YEV_B          92 l--AIVFVLFGLTAKALIQVNRPIP---------GAMKVEVTGYQFWWDFHYPEL---------------------GLRN 139 Thermus therm...
Q9YDX7          78 ---IIVMGLIVATIDETLYLEKSPPv-------eDALVVMVIGFQFGWQFEYSVGg-------------------eTVTT 128 Aeropyrum per...
vng:rrnAC2310   97 ---IIVVSLIAWTYSQLLYIEQGPDpa-----qeEALEIDVEGYRFGWDFIYPNG-----------------------HT 145 Haloarcula ma...
CAE77943        80 l--VIFLGVFGWGWY-IYHQMRAMPk--------NALEINVLGKQWAWEVEYKN----------------------GFKT 126 Bdellovibrio ...
mpdneb:Wbm0308  94 ---TIIVGILAFENAKLLKLQEKIPk--------ADITLKVIGHQWYWSYRYPEYqgvsfdsyikekddfvkgdlkLFSV 162 Wolbachia end...
BAD64928        98 i--ILLIILFIPTVTGTFDFHVNADpse----heDAVYIKVTGHQYWWQFDYEE----------------------GFTA 149 Bacillus clau...
AAS82014        92 l--AIVLVLFGLTAKALIQVNRPIP---------GALKVEVTGYQFWWDFHYPEL---------------------GLRN 139 Thermus therm...
jgi:Nwi_2313    99 g-aVLSALLIAALVLGERMIVHPLEq--------PPLKVAAQARQWTWSFAYPDSr-------------------rATLS 150 Nitrobacter w...
AAG19159        91 avvLLFVGVSAYSAMGTPYLLSSGDdvqaamaneDSATVTVEGVQWYWNYDYAGSnvsmss----------gagndTVVG 160 Halobacterium...
2YEV_B         140 SNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAIPGQTTRISF-EPKEPG-LYYGFCAELCGASHARMLFRVVVLPK 217 Thermus therm...
Q9YDX7         129 LNYLVVPSDTLIEFRVTSRDVFHAFGIPEFKNKIDAIPGILNSMWIkTPDEPGkVYNAYCYELCGIGHSLMVGKVIVVDK 208 Aeropyrum per...
vng:rrnAC2310  146 ANTLRVPQDRVVRLQVTSTDVFHNFGIPELRVKTDAVPGQYTSAWF-TANETG-TYAAKCYELCGSGHSLMTTDVVVMPQ 223 Haloarcula ma...
CAE77943       127 VNEVVVPINQDVKILLTSSDVIHSFFVPSFRIKQDAVPGRYTALWF-KADKLG-EFHLFCTEYCGTSHSGMIGKLRVVSR 204 Bdellovibrio ...
mpdneb:Wbm0308 163 DNNVVLPVNTNVRLQVTAGDVIHSWGVPAFGIKIDAIPGRLNEAWF-NVKKPG-VYYGQCYELCGQGHGFMPIVIEAVSK 240 Wolbachia end...
BAD64928       150 GQEVYIPAGEDVVFELNAEDVIHSFWVPALGGKIDNIPGVTNALTL-NADEPG-VYKGKCAELCGPSHALMDFKVIALER 227 Bacillus clau...
AAS82014       140 SNELVLPAGVPVELEITSKDVIHSFWVPGLSGKRDAIPGQTTRISF-EPKEPG-LYYGFCAELCGASHARMLFRVVVLPK 217 Thermus therm...
jgi:Nwi_2313   151 VNVLHIPAGEPVDVIVTTKDVIHSFWVPRLGGKIDAIPGHRNVVRL-QADRPG-VYGGVCAEFCGAGHSAMRFTVLAHEP 228 Nitrobacter w...
AAG19159       161 NQPLVLPADTEVTIQTESNDVIHAFHAPELGLKMDALPGQQNHLVT-NDLDEG-TYQLYCAEFCGAGHSKMLSKIHVVDR 238 Halobacterium...
2YEV_B         218 EE-FDRFVE 225 Thermus thermophilus HB8
Q9YDX7         209 EEfYNAYNS 217 Aeropyrum pernix K1
vng:rrnAC2310  224 DE-YEAWYN 231 Haloarcula marismortui ATCC 43049
CAE77943       205 ED-FDKYLE 212 Bdellovibrio bacteriovorus HD100
mpdneb:Wbm0308 241 ED-FNKWIE 248 Wolbachia endosymbiont strain TRS of Brugia malayi
BAD64928       228 DE-YDAWVE 235 Bacillus clausii KSM-K16
AAS82014       218 EE-FDRFVE 225 Thermus thermophilus HB27
jgi:Nwi_2313   229 EE-FATIMA 236 Nitrobacter winogradskyi Nb-255
AAG19159       239 DT-YDAYIN 246 Halobacterium sp. NRC-1
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