Conserved Protein Domain Family
TraF_Ti

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TIGR02771: TraF_Ti 
conjugative transfer signal peptidase TraF
This protein is found in apparent operons encoding elements of conjugative transfer systems. This family is homologous to a broader family of signal (leader) peptidases such as lepB. This family is present in both Ti-type and I-type conjugative systems.
Statistics
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PSSM-Id: 131818
View PSSM: TIGR02771
Aligned: 7 rows
Threshold Bit Score: 178.057
Threshold Setting Gi: 50878033
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAI10573   4 LFKKISvGVALAGAAGLTGAALaYSVGARINTTRSIPVGLYW--TSPSLAVEKGAYVLFCPP-HLQVFNEARERGYIGAG 80  Aromatoleum aromati...
CAG23480   1 MKAFKL-SMIGLALFITLILSL-FAIGLRWNESTSYPKGVYQ--LTSSTDYPRGTLILFCPP-DNPALQMALERQYLRFG 75  Photobacterium prof...
CAI09906  38 LYLPVL-AIWGLAYVRLFIDAT-PRLPVLFNWTPSLPYRVALl-VEDAGELHRGDYVVFAFD-GRAQADYPGLRGQ---- 109 Aromatoleum aromati...
CAF24155  11 LCISLLiGINAYGLTNLATEGT-YCQHFRLNSSSSLPFYIFS--TSSLKMVERNMYVSLTHP-FSSQ------------- 73  Candidatus Protochl...
Q44350     5 AVIRFL-GVAGLVLSGATVMGL--IGGYRVNVTPSEPLGL-WrvEKLRRPVQSGDLVFVCPP-HNAFFEEAWLRGYLRSG 79  Agrobacterium fabru...
AAF84858  10 AVLVVV-GIFGIAASGVMCL-----VGARVNTSKSIPIGLYW---TSSAPVTKGKYVIFCPP-QRTVFDNARKRGYIGPG 79  Xylella fastidiosa ...
CAG37889   4 LIFFCL-SILLIIFIGNEFCY--------INITKSLPLGIYR---TIKSPPTYGSCVVFKLPeDNPMAELAIRRGYAKED 71  Desulfotalea psychr...
CAI10573  81 FCAGGYGYLMKRVLAAKGDDVAVsADGVRVNGVLLPFSAPKAVDAGGRPLPRF-H-ATRYILGaaeLLLMSDMSG-TSFD 157 Aromatoleum aromati...
CAG23480  76 LCKGGFEPVIKRIVGIGGERVTF-TDVISINQQQLPNTHRLQHDGFNRPLPQL-D-NFTLPDKt--FFVISDHKPaSSFD 150 Photobacterium prof...
CAI09906 110 -------PFFKIVRGLPGDAVTVrGRVVAINGMTVGVAKAHAHDR--RPLAPI-A-PTVIPPG---YFYVQGTSP-DSFD 174 Aromatoleum aromati...
CAF24155  74 -------ELLKQIVGLPGDLITIrDQHVWVND--KDYGFIYSTSPSGLALSPL-P-EGIIPQG---FFFVHATHP-QSFD 138 Candidatus Protochl...
Q44350    80 LCPGWFAPLIKSVLALPGQRVEI-ADRIVIDGHPVSASTVSATDSEGRAIAPF-A-GGVVPPG---FLFLHSSFA-SSYD 152 Agrobacterium fabru...
AAF84858  80 FCPGGYGYMMKKILAAKGDTVSVtPQGVAVNGKLLPYSKPLLVDGVGRSMPRM-S-DERYTLGeseLLLMTDRSS-TSFD 156 Xylella fastidiosa ...
CAG37889  72 Q------PFLKRVAYLEGDSYNL--------------PETEEFDSRGRKMEPFkPsSGYVAKG---MIVVRGDSS-TSFD 127 Desulfotalea psychr...
CAI10573 158 GRY--FGPINRSQIVTVVSPVITW 179 Aromatoleum aromaticum EbN1
CAG23480 151 SRY--YGAIPRGNVIGRIKPLFLL 172 Photobacterium profundum SS9
CAI09906 175 SRYaaSGLVRADQVIGRAVPLF-- 196 Aromatoleum aromaticum EbN1
CAF24155 139 SRYaeFGLVSKEQLKERLCPLF-- 160 Candidatus Protochlamydia amoebophila UWE25
Q44350   153 SRY--FGPIPDSGLLGLARPVFTF 174 Agrobacterium fabrum str. C58
AAF84858 157 ARY--YGIISREQVKSVIRPVLTW 178 Xylella fastidiosa 9a5c
CAG37889 128 SRY--FGPIYAKNIEAIVKPLLTW 149 Desulfotalea psychrophila LSv54
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