Conserved Protein Domain Family
TrbC_Ftype

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TIGR02742: TrbC_Ftype 
type-F conjugative transfer system pilin assembly protein TrbC
This protein is an essential component of the F-type conjugative pilus assembly system for the transfer of plasmid DNA. The N-terminal portion of these proteins are heterogeneous and are not covered by this model.
Statistics
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PSSM-Id: 131789
View PSSM: TIGR02742
Aligned: 9 rows
Threshold Bit Score: 159.478
Threshold Setting Gi: 16445279
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAH17209        85 AVLFVSFSMPEPLLFSLSDEAAAYKIPVVINGLIEGDFKKTITVFSKLHAKAKEskwafNGVSIDPLWFEQFHITAVPAL 164 Legionella pn...
BAC97737       105 VMVFVSLTMPENALKQLLMQSEHLGVPLVIRGVLTDGFPATAKRIESLIRSPNKap-ikSGFSISPDWFKQFGITKVPAF 183 Vibrio vulnif...
CMCP6:VV2_0644 104 VMIFVSLTMPKSSLQALLKQSEIWQVPLVIRGVLPDGFMTTVNNIQSLLQTNEKkp-inSGFAISPEWFQTFNILEVPTF 182 Vibrio vulnif...
CAG17950       103 VIIFASLTMPSTALKQLMMQSSDLQVPIIIRGVLPQGFPATVAAIQSLIHSEDDev-inSGMAINPLWFKQLGIQRVPAF 181 Photobacteriu...
cucgc:lpg2084   91 VLVFLSFSMPEKSLKAWLLQCKKSGATPVIRGLIHNSFKETMTAIQTLSKKTG------IGMQLDPILFKTFDIAMVPAV 164 Legionella pn...
CAI09910       117 LLVFVSLSMPQPTLQRLIDQAARAQASIVLRGFADGSLRTTVARVQRLIGDRQ------VAVQIDPQAFDRYAVTRVPAF 190 Aromatoleum a...
CAI10374       122 LMLFVSFSMPPDVIREYSRQAQAAGATLVLRGNYKGGTVRRTTEQAGALNAGG------AGWIINPEVFTGYKIDAVPAL 195 Aromatoleum a...
AAL23497        92 AVYFISFSIPEEGLKRMLGETRRYGIPATLRGMRDNDLKATADAVLSLVKDGAT-----DGVQIDPTLFTKYDIRSVPTL 166 Salmonella en...
CAF24157        79 LYVFMSFSLDDRLWVQLSQELEKLGGIFVLRGLPQNSFKELANRIFTLQEQGVR-----VPIQIHPQLFQRFDIQLVPTI 153 Candidatus Pr...
CAH17209       165 VVSKRPs---SCGQQLICPEQTYDVVYGNASIKNSLQLIAqKGDSANe--VAQALLENTH 219 Legionella pneumophila str. Paris
BAC97737       184 VSVKPG----RCLPEQPCAATDYDILYGNISLYQALDYLA-DGDAQQ---NVHPLLHTLY 235 Vibrio vulnificus YJ016
CMCP6:VV2_0644 183 VAVKPG----RCLPKQPCSESDYDIVKGNVSLPNALEHLA-NGDNPD---VVRQVLQRIK 234 Vibrio vulnificus CMCP6
CAG17950       182 AVIKPG----ACLPQQPCQDSDFDVLVGNVSLYDALATLArDGDVPN---IAQQVLSRRK 234 Photobacterium profundum SS9
cucgc:lpg2084  165 VYVKDTp---ACPANMDCKPVSYDSLYGDVSLDYALEKMRgDEQSEDp--VLDQMILRLR 219 Legionella pneumophila subsp. pne...
CAI09910       191 VLVRDGarpvACAGGSCAPSEIFLRTSGDVSLDYALEYMQrSAPGFGs--AADTFLKRIR 248 Aromatoleum aromaticum EbN1
CAI10374       196 VLSRDNl---NVDDEGCFPVGEYASVFGDISIIGSLEKISqSATKPEirqLAAKRLAMIK 252 Aromatoleum aromaticum EbN1
AAL23497       167 VVYCRQg---------------YDVIRGNLRVKQALEKVVtAGDCRQ---VAAGLLDGAG 208 Salmonella enterica subsp. enteri...
CAF24157       154 AVTEGEq---------------YDKISGNLSIQGALEKMSlYGETQRakfLLQQWKEQQK 198 Candidatus Protochlamydia amoebop...
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