Conserved Protein Domain Family
WPE_wolbac

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TIGR02697: WPE_wolbac 
Wolbachia palindromic element (WPE) domain
This domain conceptually resembles TIGR01045, the Rickettsial palindromic element (RPE) domain. In both cases, a protein-coding palindromic element spreads through a genome, inserting usually in protein-coding regions. The additional protein coding sequence is thought to allow function of the host protein because of location in surface-exposed regions of the protein structure. Note that this model appears to work better in fragment mode. [Mobile and extrachromosomal element functions, Other]
Statistics
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PSSM-Id: 131744
View PSSM: TIGR02697
Aligned: 8 rows
Threshold Bit Score: 53.6722
Threshold Setting Gi: 42410073
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAS14184     309 WIPVSGHWDDTIGATGMTgerATQMTKeggcdqkEEWIPVSATRMT 354  Wolbachia endosymbiont of Drosophila melanogaster
AAS14596      82 VIPVLDYLDPENLIANEH---TKQLHN-------KNWIPVSATCMT 117  Wolbachia endosymbiont of Drosophila melanogaster
AAS14716      62 VIPVLDYLDPENLTVNER---TRQLYN-------KNWIPVSATCMT 97   Wolbachia endosymbiont of Drosophila melanogaster
AAS14781     270 VIPVLDYLDPGSSIANEH---IRRLYN-------KDWIPASRAGMT 305  Wolbachia endosymbiont of Drosophila melanogaster
AAS14632     110 VIRVAWHWDPENLITNGH---IRQLCN-------KNWIPVSRTGMT 145  Wolbachia endosymbiont of Drosophila melanogaster
AAS13976     119 VIPVPRHWDPDNLIANEY---IKWQCN-------KNWIPVSSTGMT 154  Wolbachia endosymbiont of Drosophila melanogaster
AAS14417      72 WIPVPRHWDDILLVYNIRt--VVYMTQgsi--tlLFWIPVSAICMT 113  Wolbachia endosymbiont of Drosophila melanogaster
WP_022626375 248 CSPVPRHWDPENLTLNER---TRWLYN-------ENWIPVSATWMT 283  Wolbachia endosymbiont of Drosophila melanogaster
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