Conserved Protein Domain Family
tape_meas_nterm

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TIGR02675: tape_meas_nterm 
tape measure domain
Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Statistics
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PSSM-Id: 131723
View PSSM: TIGR02675
Aligned: 22 rows
Threshold Bit Score: 57.3088
Threshold Setting Gi: 28854439
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
hbprmlniaid:M6_Spy1351  142 LNNAFLASGASSEAASRGLEQYAQMLSAGKVDMQAWKTLQ-ET-MPYALQQTAEAFG--FAGASAQkdfyEALKNGQITF 217  Str...
AAS09193                139 LNDAFIASGASAEDASRGLIQYTQMLSTGKVDMMSWRSLE-ET-MPYALQKVAKSFG--IASGSMQdl-ySKVQSGQISM 213  Lac...
AAO81743                149 LNNGILGFGGSAEMVENAIIQLSQSFSNGKVDAETWNSMI-NSgLGPALNALAKQMG--LTAGQMK----AGLSDGSISV 221  Ent...
AAO81829                288 LNNAILAGGMSREIQSSALEQISQSYSKGKPDMIEWRSLL-TA-MPAQVDQIGKSFG--LTSDQLG----EALRNGNISM 359  Ent...
AAS95968                242 VSQAGAALALSQDDMNGVFIALSQMMSKGKVQAEELRGQL-GErLPGAFNLAARAMG--VTTAELD----KMLEQGQVLA 314  Des...
AAN53758                353 IVDQAFKLGGGFQEVEGITLALGQAWAKQKLQGEEILQLI-ERgVP-VWDMLAKVTG--KNSLELE----KLSSQGKLGR 424  She...
BAD65358                140 IGDAAAGAGKGSEGLNMIASAFGDIQVAGKLGMDQINRLA-SNgVP-ALQILANQAG--ISAEEMR----KKISDGSIGA 211  Bac...
P44236                  144 LVDYNAKVGGDKANLDGYISAISKGFIKGKLSMEEINPLL-ERnVK-VFEILAKETGgkYTADQMQ----KMLQEGKLGR 217  Hae...
WP_010905386            370 FVNLGRATGKSDDAMQNIITKFTQMNASGEITSGSITKME-KT-LPGFAKTLATTMG--VSRDKLN----ELANNGKISM 441  Lac...
WP_002227565            339 LVDSVARFGGDSELLKRAAVAVQQMSGKGVVSMEELRQQLgEA-VPNAMKAMADAAG--ITMGELT----KAVSTGTVEA 411  Yer...
hbprmlniaid:M6_Spy1351  218 DQF 220  Streptococcus pyogenes MGAS10394
AAS09193                214 KQL 216  Lactobacillus johnsonii NCC 533
AAO81743                222 EEF 224  Enterococcus faecalis V583
AAO81829                360 DQF 362  Enterococcus faecalis V583
AAS95968                315 DDL 317  Desulfovibrio vulgaris str. Hildenborough
AAN53758                425 DVI 427  Shewanella oneidensis MR-1
BAD65358                212 EEA 214  Bacillus clausii KSM-K16
P44236                  218 KAI 220  Haemophilus influenzae Rd KW20
WP_010905386            442 SDL 444  Lactococcus lactis
WP_002227565            412 KQA 414  Yersinia pestis
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