Conserved Protein Domain Family
cas_csx8
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TIGR02670: cas_csx8 
CRISPR-associated protein Cas8a1/Csx8, subtype I
In three genomes so far, a member of this protein appears in the midst of a CRISPR-associated (cas) gene operon, immediately upstream of a member of family TIGR01875 (CRISPR-associated autoregulator, DevR family). The genomes so far are Nocardia farcinica IFM10152, Clostridium perfringens SM101, and Clostridium tetani E88.
Links
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Statistics
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PSSM-Id: 274253
Aligned: 3 rows
Threshold Bit Score: 541.03
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAL95378      12 FDTAISASDWKYSAAITGLIYYFKELEKKyeikkitiDEITDSYLLYNKEDINEENYLDFIEKFYSkyseDTLAHKKLEN 91  Fusobacterium n...
AAO35717      10 YDTMLEPSDWRFSATIVGLLQYLNYHDLD--------YKLEEDYILYNSSGINEERYLDFVEYKYG----EELHHRLVEN 77  Clostridium tet...
WP_011591962   6 FDCTLESGDWRESATIVGLIKYFDFLYQNgvadkselYEFEDDYLRYNSNYISEENYLLFVEKYFK----DAMHHKVVEN 81  Clostridium per...

AAL95378      92 QLKHtKEFTSEIIKSIKENMSANTVLKKVFSKTKFDGTNKDEVLKLLDENRHSIIKETFRNKKDLYDNYCQTSRLLEKgD 171 Fusobacterium n...
AAO35717      78 ILSN-EEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEILDIINKNRYELIRETFRRKSNMYANYGNTNQLFND-S 155 Clostridium tet...
WP_011591962  82 ILLK-DELSEDEISIINDKLKANQAMKSIFGKIKYTGENKEEILDLIEKNRLKLIKETYRRGKSLYSNFANENLLFSD-N 159 Clostridium per...

AAL95378     172 NSPCRLKGYYFDPNRKSKATGYNFVSSSVDYFDDEIFDFIPFAFTGSsFETIFLNDNLDLEILEnmnyklreyfseeken 251 Fusobacterium n...
AAO35717     156 QDHCRLLGYCIDTGKKGKSTGFNFMMSTFVGSDIKEFDFIPFAFEGS-REAFFINDNYTIQRLK---------------- 218 Clostridium tet...
WP_011591962 160 NKVCRLVNYCADMGKKGKSLGYYWDNNTFEFKDEKIFDFIPFAFSKS-YDAFFINNNVSIKELK---------------- 222 Clostridium per...

AAL95378     252 eterlkslKQEKAIKEKKNEETEGNQNSVPLKKLFLNILQKKVDYIKYGMEIIYKNRDKEYFETWYLRNESIKVLKE--- 328 Fusobacterium n...
AAO35717     219 --------ISNEILSKKIEDDLEGENKRKDARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEfin 290 Clostridium tet...
WP_011591962 223 --------KSNSFIEN-------SEN----TRTTLFGNMKESAEYIGFDVEVILKSRDKNYYETVYVREKAINIFKQs-- 281 Clostridium per...

AAL95378     329 -IEDFSKLDIRIKITDKYYFNLLDEVFSAVLNLSLLTNSILYLLKDREsfikidttrenlsklfkYNYAINELIKVNQII 407 Fusobacterium n...
AAO35717     291 eKIEYKSFCFSHKVTDKYYINIQKKVTESILNNVLLDELIEIFLKEKN-----------------RSYLVLQLIKINVLI 353 Clostridium tet...
WP_011591962 282 dDFDYKGIKFWYRDDEKNSKYMEPEVVNRILNGIRMDSIIELLFKSKNn----------------HSYNIKTLIAINNLI 345 Clostridium per...

AAL95378     408 RNGgKEMDENLKKsIKACSIAVVKKFIKenslNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFAFDYIENQT 487 Fusobacterium n...
AAO35717     354 RRD-KTMKDRLKG-AFACAKQVSKAIES----NKLDSYKQKLTSSIIFKDYDRVCQILLQLSNYSGIEFGFVYDLYDDFE 427 Clostridium tet...
WP_011591962 346 YEGgSEMTEKMKS-AYASAKEVRDKLKNq--eNKINSYKQKLISAVTFKDKDRFCEILLQLSSFSGVVFDFAYDLFEDFE 422 Clostridium per...

AAL95378     488 QNEDIIHYFILEL 500 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
AAO35717     428 ENKDLAYTFINAL 440 Clostridium tetani E88
WP_011591962 423 NNKNLAYTFINAL 435 Clostridium perfringens
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