1WW1


Conserved Protein Domain Family
RNase_Z_T_toga

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TIGR02650: RNase_Z_T_toga 
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ribonuclease Z, Thermotoga type
Members of this protein family are ribonuclease Z as found in the genus Thermotoga, where the enzyme cleaves after the CCA, in contrast to the activities characterized for other enzymes also designated ribonuclease Z. In other systems, cleavage occurs 5-prime to the location of the CCA sequence, and CCA is added subsequently. A species may lack ribonuclease Z if all tRNA genes encode the CCA sequence, or if the CCA is exposed by exonuclease activity rather than endonuclease activity. Note that members of this sequence family differ considerably from the majority of RNase Z sequences. [Transcription, RNA processing]
Statistics
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PSSM-Id: 188239
Aligned: 2 rows
Threshold Bit Score: 530.35
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WW1_A         2 NIIGFSKALFSTWIYYSPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPE 81  Thermotoga mari...
WP_015920125   2 NIIGFSKALFSTWIYYSPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPK 81  Thermotoga neap...
1WW1_A        82 GNRAVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDS 161 Thermotoga mari...
WP_015920125  82 GNRAVEEYTSFIKKANPELRFSFNVHPLEEGDRVFLRDAGGFKRYVQPFRTKHVATEVSFGYHIFEVRRKLKEEFQGLDS 161 Thermotoga neap...
1WW1_A       162 KEISRLVKEKGRDFVTEEYHKKVLTISGDSLALDPEEIRGTELLIHECTFLDARDRRYKNHAAIDEVMESVKAAGVKKVI 241 Thermotoga mari...
WP_015920125 162 KVIARLVKEKGRDFVTREYHKKILTISGDSLALDPEEVEGTELLIHECTFLDPRDRRYKNHASIDEVMETVKKAGVKRVI 241 Thermotoga neap...
1WW1_A       242 LYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVF 278 Thermotoga maritima MSB8
WP_015920125 242 LYHISTRYIRSIRSVIKKYREMLPDVEITYMDPRRVF 278 Thermotoga neapolitana
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