Conserved Protein Domain Family
phage_xxxx
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TIGR02642: phage_xxxx 
uncharacterized phage protein
This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q. [Mobile and extrachromosomal element functions, Prophage functions]
Links
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Statistics
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PSSM-Id: 274243
Aligned: 4 rows
Threshold Bit Score: 215.507
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
CAH21042       2 TTAIEQLIKMHDPRCVSIEslnIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRPH 81  Yersinia pseudo...
AAN55993       1 MISIERLFELLSPRGLSIG---AAGGKGVFSKEDAMGVVAQVQGKYPVGVKVLEAAICGDVDAEDVLVKALCKQYEVDFR 77  Shewanella onei...
BAC96885       2 GKKLEMLTILSAARTMKWEertLKNGP---TKEQLLGAIGLAQRDNPIGIAILSAKYMRCAYSIEKLYDHIKEQPLPLIT 78  Vibrio vulnific...
WP_011705909   2 TNSIEMALRLFSPKGALHEp-aACRQFNALGRDEFIGALQVAAKNNPLGLQFLMADHLSDMEAIQGLLAHFCTTLDCSDA 80  Aeromonas hydro...

CAH21042      82 P-ARAIAACQLALNMVLDrnlpaqveqiatllrrygsrtgitrkvvdglqqqikllerdkaqalddgtialladeiktlq 160 Yersinia pseudo...
AAN55993      78 P-VAASALAKLAVNEVCG-------------------------------------------------------------- 94  Shewanella onei...
BAC96885      79 R-NQREHASYLLVSDALNlpidviqkriigawkrysmrgertrktidslkksikslekaillknspqeikhlesqieahk 157 Vibrio vulnific...
WP_011705909  81 GgMAMAILLRRPLPEQLErlvlshphydkvrrraavvmekakrahrag-----------------------ndneyqrll 137 Aeromonas hydro...

CAH21042     161 skiktergalrawanhqaaiKQVCPRCHGAGKTLRPHpEICNECGGSGRIPPTMEHLRKSMG--IIGAEISGGDWAAQYV 238 Yersinia pseudo...
AAN55993      95 --------------------TRTCPKCKGTKLNYHRN-GECKHCNGTGKLLKTVEQLTKSFCd-LSGAKITPEQFSQHFY 152 Shewanella onei...
BAC96885     158 aridteerslhdyatqkageSCKCPRCRATGTIQKTQ-RQCDTCAGVGEFRTLEHDWLKSLIvsDSAGAKVLKDNWPSVV 236 Vibrio vulnific...
WP_011705909 138 aerneilqlgrdhcvaemmqSGRCPHCRGTGLRPRRG-DECPKCHGTGRVVPNVELVSRRFG--------------VQMR 202 Aeromonas hydro...

CAH21042     239 PLVKECMHWLYVEESSAGEVLIERIQLEKD 268 Yersinia pseudotuberculosis IP 32953
AAN55993     153 DKYMDGVDALHQHEHDAARFAKKVLRLVGQ 182 Shewanella oneidensis MR-1
BAC96885     237 TSMRAQKDALRRHELEAVSAVERRISAEFE 266 Vibrio vulnificus YJ016
WP_011705909 203 QSVERAVDEVIHQASDLARVMDRQVREMSS 232 Aeromonas hydrophila
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